Edinburgh/29 July 2008

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=== Week 7 ===
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==== Tuesday 29 July 08 ====
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* Transformation of L20 and L21 failed.
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* Transformation of ''glgC''-mut1,2 ligation product, made '''plate 67 & 68''' (Yan)
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* Cut out putative ''cenA'' and ''cex'' (both ~1.5kb) fragments from '''gel 27''' (repeat of Gel 26 but stained with SYBRsafe). Purified DNA from gel fragments: '''F1''' (putative ''cenA'') and '''F2''' (putative ''cex''). (AM)
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* Digests of M49 to M54 (pSB1A2+rbs+''crtI'') with EcoRI alone. This should generate a single 4 kb band (doing an EcoRI/PstI double digest would give a vector and insert band both around 2 kb, which would probably run at the same place, making it hard to tell whether there was an insert). These were run on '''Gel 28'''. All showed a single band at the expected place. (CF)
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* Minipreps of pSB1A2+pZntA ('''M55 to M60''') from L23 (Yan, Nimisha)
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* Minipreps of pSB1A2+rbs+''crtE'' ('''M61 to M66''') from L22 (Yan, Nimisha)
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** Double digests of M55 to M60 and M61 to M66 with EcoRI/PstI. This should generate the following bands: ~2.2 kb for pZntA (M55 to M60), ~1.1 kb for rbs+''crtE'' (M61 to M66), and ~2 kb for the pSB1A2 vector. These were run on '''Gel 29'''. M55 to M60 unsuccessful; M61 to M66 showed a band at the expected location for rbs+''crtE'' but seemed to be indicate that L22 was still ligated into BABEL2 instead of pSB1A2. (Yan & AM)
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:::: '''[[Edinburgh/28_July_2008|< Previous Entry]]'''
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== Week 7 ==
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=== Tuesday 29 July 08 ===
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* Transformations of L20 (pSB1A2+rbs+''appY'') and L21 (pSB1A2+rbs+''crtB''), plates 63-66, failed.
 +
* Transformation of L25 (pSB1A2+''glgC''-mut1,2) to '''plates 67-68''' (Yan)
 +
* Cut out putative ''cenA'' and ''cex'' (both ~1.5kb) fragments from '''gel 27''' (repeat of Gel 26 but stained with SYBRsafe). Purified DNA from gel fragments. (AM)
 +
* Digests of M49-M54 (pSB1A2+rbs+''crtI'') with EcoRI alone. This should generate a single 4 kb band (doing an EcoRI/PstI double digest would give a vector and insert band both around 2 kb, which would probably run at the same place, making it hard to tell whether there was an insert). These were run on '''Gel 28'''. All showed a single band at the expected place. (CF)
 +
* Minipreps of putative pSB1A2+pZntA ('''M55-M60''') from L23 and putative pSB1A2+rbs+''crtE'' ('''M61-M66''') from L22. (Yan, Nimisha)
 +
** Double digests of M55-M66 with EcoRI/PstI. This should generate the following bands: ~2.2 kb for pZntA (M55-M60), ~1.1 kb for rbs+''crtE'' (M61 to M66), and ~2 kb for the pSB1A2 vector. These were run on '''Gel 29'''. M55-M60 unsuccessful; M61-M66 showed a band at the expected location for rbs+''crtE'' but seemed to indicate that L22 was still ligated into BABEL2 instead of pSB1A2. (Yan, AM)<br />
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<br />
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:::: '''[[Edinburgh/30_July_2008|Next Entry >]]'''

Revision as of 15:19, 26 August 2008

Edinburgh iGEM 2008

 

June
MTWTFSS
            [http://2008.igem.org/wiki/index.php?title=Edinburgh/1_June_2008&action=edit 1]
[http://2008.igem.org/wiki/index.php?title=Edinburgh/2_June_2008&action=edit 2] [http://2008.igem.org/wiki/index.php?title=Edinburgh/3_June_2008&action=edit 3] [http://2008.igem.org/wiki/index.php?title=Edinburgh/4_June_2008&action=edit 4] [http://2008.igem.org/wiki/index.php?title=Edinburgh/5_June_2008&action=edit 5] [http://2008.igem.org/wiki/index.php?title=Edinburgh/6_June_2008&action=edit 6] [http://2008.igem.org/wiki/index.php?title=Edinburgh/7_June_2008&action=edit 7] [http://2008.igem.org/wiki/index.php?title=Edinburgh/8_June_2008&action=edit 8]
[http://2008.igem.org/wiki/index.php?title=Edinburgh/9_June_2008&action=edit 9] [http://2008.igem.org/wiki/index.php?title=Edinburgh/10_June_2008&action=edit 10] [http://2008.igem.org/wiki/index.php?title=Edinburgh/11_June_2008&action=edit 11] [http://2008.igem.org/wiki/index.php?title=Edinburgh/12_June_2008&action=edit 12] [http://2008.igem.org/wiki/index.php?title=Edinburgh/13_June_2008&action=edit 13] [http://2008.igem.org/wiki/index.php?title=Edinburgh/14_June_2008&action=edit 14] [http://2008.igem.org/wiki/index.php?title=Edinburgh/15_June_2008&action=edit 15]
[http://2008.igem.org/wiki/index.php?title=Edinburgh/16_June_2008&action=edit 16] [http://2008.igem.org/Edinburgh/17_June_2008 17] [http://2008.igem.org/wiki/index.php?title=Edinburgh/18_June_2008&action=edit 18] [http://2008.igem.org/Edinburgh/19_June_2008 19] [http://2008.igem.org/Edinburgh/20_June_2008 20] [http://2008.igem.org/wiki/index.php?title=Edinburgh/21_June_2008&action=edit 21] [http://2008.igem.org/wiki/index.php?title=Edinburgh/22_June_2008&action=edit 22]
[http://2008.igem.org/wiki/index.php?title=Edinburgh/23_June_2008&action=edit 23] [http://2008.igem.org/Edinburgh/24_June_2008 24] [http://2008.igem.org/Edinburgh/25_June_2008 25] [http://2008.igem.org/Edinburgh/26_June_2008 26] [http://2008.igem.org/Edinburgh/27_June_2008 27] [http://2008.igem.org/Edinburgh/28_June_2008 28] [http://2008.igem.org/Edinburgh/29_June_2008 29]
[http://2008.igem.org/Edinburgh/30_June_2008 30]
July
MTWTFSS
  [http://2008.igem.org/Edinburgh/1_July_2008 1] [http://2008.igem.org/Edinburgh/2_July_2008 2] [http://2008.igem.org/Edinburgh/3_July_2008 3] [http://2008.igem.org/Edinburgh/4_July_2008 4] [http://2008.igem.org/Edinburgh/5_July_2008 5] [http://2008.igem.org/Edinburgh/6_July_2008 6]
[http://2008.igem.org/Edinburgh/7_July_2008 7] [http://2008.igem.org/Edinburgh/8_July_2008 8] [http://2008.igem.org/Edinburgh/9_July_2008 9] [http://2008.igem.org/Edinburgh/10_July_2008 10] [http://2008.igem.org/Edinburgh/11_July_2008 11] [http://2008.igem.org/Edinburgh/12_July_2008 12] [http://2008.igem.org/Edinburgh/13_July_2008 13]
[http://2008.igem.org/Edinburgh/14_July_2008 14] [http://2008.igem.org/Edinburgh/15_July_2008 15] [http://2008.igem.org/Edinburgh/16_July_2008 16] [http://2008.igem.org/Edinburgh/17_July_2008 17] [http://2008.igem.org/Edinburgh/18_July_2008 18] [http://2008.igem.org/Edinburgh/19_July_2008 19] [http://2008.igem.org/Edinburgh/20_July_2008 20]
[http://2008.igem.org/Edinburgh/21_July_2008 21] [http://2008.igem.org/Edinburgh/22_July_2008 22] [http://2008.igem.org/Edinburgh/23_July_2008 23] [http://2008.igem.org/Edinburgh/24_July_2008 24] [http://2008.igem.org/Edinburgh/25_July_2008 25] [http://2008.igem.org/Edinburgh/26_July_2008 26] [http://2008.igem.org/Edinburgh/27_July_2008 27]
[http://2008.igem.org/Edinburgh/28_July_2008 28] [http://2008.igem.org/Edinburgh/29_July_2008 29] [http://2008.igem.org/Edinburgh/30_July_2008 30] [http://2008.igem.org/Edinburgh/31_July_2008 31]
August
MTWTFSS
        [http://2008.igem.org/Edinburgh/1_August_2008 1] [http://2008.igem.org/wiki/index.php?title=Edinburgh/2_August_2008&action=edit 2] [http://2008.igem.org/Edinburgh/3_August_2008 3]
[http://2008.igem.org/Edinburgh/4_August_2008 4] [http://2008.igem.org/Edinburgh/5_August_2008 5] [http://2008.igem.org/Edinburgh/6_August_2008 6] [http://2008.igem.org/Edinburgh/7_August_2008 7] [http://2008.igem.org/Edinburgh/8_August_2008 8] [http://2008.igem.org/Edinburgh/9_August_2008 9] [http://2008.igem.org/Edinburgh/10_August_2008 10]
[http://2008.igem.org/Edinburgh/11_August_2008 11] [http://2008.igem.org/Edinburgh/12_August_2008 12] [http://2008.igem.org/Edinburgh/13_August_2008 13] [http://2008.igem.org/Edinburgh/14_August_2008 14] [http://2008.igem.org/Edinburgh/15_August_2008 15] [http://2008.igem.org/Edinburgh/16_August_2008 16] [http://2008.igem.org/Edinburgh/17_August_2008 17]
[http://2008.igem.org/Edinburgh/18_August_2008 18] [http://2008.igem.org/Edinburgh/19_August_2008 19] [http://2008.igem.org/Edinburgh/20_August_2008 20] [http://2008.igem.org/Edinburgh/21_August_2008 21] [http://2008.igem.org/Edinburgh/22_August_2008 22] [http://2008.igem.org/wiki/index.php?title=Edinburgh/23_August_2008&action=edit 23] [http://2008.igem.org/wiki/index.php?title=Edinburgh/24_August_2008&action=edit 24]
[http://2008.igem.org/Edinburgh/25_August_2008 25] [http://2008.igem.org/Edinburgh/26_August_2008 26] [http://2008.igem.org/Edinburgh/27_August_2008 27] [http://2008.igem.org/Edinburgh/28_August_2008 28] [http://2008.igem.org/Edinburgh/29_August_2008 29] [http://2008.igem.org/wiki/index.php?title=Edinburgh/30_August_2008&action=edit 30] [http://2008.igem.org/wiki/index.php?title=Edinburgh/31_August_2008&action=edit 31]


< Previous Entry

Week 7

Tuesday 29 July 08

  • Transformations of L20 (pSB1A2+rbs+appY) and L21 (pSB1A2+rbs+crtB), plates 63-66, failed.
  • Transformation of L25 (pSB1A2+glgC-mut1,2) to plates 67-68 (Yan)
  • Cut out putative cenA and cex (both ~1.5kb) fragments from gel 27 (repeat of Gel 26 but stained with SYBRsafe). Purified DNA from gel fragments. (AM)
  • Digests of M49-M54 (pSB1A2+rbs+crtI) with EcoRI alone. This should generate a single 4 kb band (doing an EcoRI/PstI double digest would give a vector and insert band both around 2 kb, which would probably run at the same place, making it hard to tell whether there was an insert). These were run on Gel 28. All showed a single band at the expected place. (CF)
  • Minipreps of putative pSB1A2+pZntA (M55-M60) from L23 and putative pSB1A2+rbs+crtE (M61-M66) from L22. (Yan, Nimisha)
    • Double digests of M55-M66 with EcoRI/PstI. This should generate the following bands: ~2.2 kb for pZntA (M55-M60), ~1.1 kb for rbs+crtE (M61 to M66), and ~2 kb for the pSB1A2 vector. These were run on Gel 29. M55-M60 unsuccessful; M61-M66 showed a band at the expected location for rbs+crtE but seemed to indicate that L22 was still ligated into BABEL2 instead of pSB1A2. (Yan, AM)


Next Entry >