Team:Paris/Modeling/Bibliography

From 2008.igem.org

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== <center> '''References''' </center> ==
== <center> '''References''' </center> ==
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[1] Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics from Living Bacteria
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[1] ''Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics from Living Bacteria''
S. Kalir, J. McClure, K. Pabbaraju, C. Southward, M. Ronen, S. Leibler, M. G. Surette, U. Alon,
S. Kalir, J. McClure, K. Pabbaraju, C. Southward, M. Ronen, S. Leibler, M. G. Surette, U. Alon,

Revision as of 11:38, 23 July 2008

All the parameters we might have to introduce in our models

Diag expr time.jpg expression of the fl-genes observed in [1]

Contents

flhDC + fliA → pfliA → fliA → ∅

flhDC + fliA → pfliL → Z1 → ∅

flhDC + fliA → pflgA → Z2 → ∅

flhDC + fliA → pflgB → Z2 → ∅

flhDC + fliA → pflhB → Z3 → ∅

lasI → 3OC12HSL → ∅

d[HSL]/dt = -D * Grad²([HSL])

lasR → Rec → ∅

3OC12HSL + Rec → HSL-Rec → ∅

HSL-Rec + pRep → TetR → ∅

∅ → aTc → ∅

TetR + aTc → pTet → flhDC → ∅

OmpR* → pflhDC → flhDC → ∅

References

[1] Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics from Living Bacteria S. Kalir, J. McClure, K. Pabbaraju, C. Southward, M. Ronen, S. Leibler, M. G. Surette, U. Alon,

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