All the parameters we might have to introduce in our models
expression of the fl-genes observed in [1]
flhDC + fliA → pfliA → fliA → ∅
flhDC + fliA → pfliL → Z1 → ∅
the contributions of flhDC and fliA in the activity of pfliL appear to be a SUM :
act_pfliL(DC,A)=act_pfliL(DC,0)+act_pfliL(0,A)
is it the same for the other promoters under the influence of both flhDC and fliA ?
flhDC + fliA → pflgA → Z2 → ∅
flhDC + fliA → pflgB → Z2 → ∅
flhDC + fliA → pflhB → Z3 → ∅
lasI → 3OC12HSL → ∅
d[HSL]/dt = -D * Grad²([HSL])
lasR → Rec → ∅
3OC12HSL + Rec → HSL-Rec → ∅
HSL-Rec + pRep → TetR → ∅
∅ → aTc → ∅
TetR + aTc → pTet → flhDC → ∅
OmpR* → pflhDC → flhDC → ∅
References
[1] Ordering Genes in a Flagella Pathway by Analysis of Expression Kinetics from Living Bacteria
S. Kalir, J. McClure, K. Pabbaraju, C. Southward, M. Ronen, S. Leibler, M. G. Surette, U. Alon,
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