Revision as of 12:01, 2 September 2008

(Under Construction)

Simulations and Mathematical analysis

Oscillations

etude math+explication

The goal here is to present the results of the simulations we made concerning the FIFO part of the system.

Here is the system we implementated using Matlab

and the corresponding equations (for more detailed information see our establishment of the model).

We wanted to see if our predictions were accurate or not. We then solved the equations, forcing the behavior of FhlDC. In a first step, we imposed a constant production term of 1. Then, at a certain time, we set this production term to zero :

We saw previously that without FliA, the FIFO would presumably not work. We then simulated a first system, where [FliA] stays to zero value

simul plsrs cells
Etude maths

@@ Line 13: / Line 13: @@
 [[Image:Subsystem1.jpg|center]]
 and the corresponding equations (for more detailed information see our [[Team:Paris/Modeling/BOB#First_Subsystem|establishment of the model]]).
 [[Image:FliA_dynamics.jpg|center]]
 [[Image:CFP.jpg|center]]
 [[Image:YFP.jpg|center]]
 [[Image:RFP.jpg|center]]
+* We wanted to see if our predictions were accurate or not. We then solved the equations, forcing the behavior of FhlDC. In a first step, we imposed a constant production term of 1. Then, at a certain time, we set this production term to zero :
+[[Image:FlhDC_Test_FIFO_cresc.jpg|center]]
+[[Image:FlhDC_Test_FIFO_decresc.jpg|center]]
+* We saw [[Team:Paris/Modeling/BOB#Which_gene_goes_were|previously]] that without FliA, the FIFO would presumably not work. We then simulated a first system, where [FliA] stays to zero value