Team:Heidelberg/Notebook/Killing II/Notebook

From 2008.igem.org

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Line 21: Line 362:
<li><a href="https://2008.igem.org/Team:Heidelberg/Team_Members#Advisors"><span><span>Advisors</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Team_Members#Advisors"><span><span>Advisors</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Team_Members#Undergraduates"><span><span>Undergraduates</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Team_Members#Undergraduates"><span><span>Undergraduates</span></span></a></li>
 +
<li><a href="https://2008.igem.org/Team:Heidelberg/Team#There_are_many_Universities_-_and_there_is_Heidelberg_..."><span><span>University</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Team#DKFZ"><span><span>DKFZ</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Team#DKFZ"><span><span>DKFZ</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Team#Bioquant"><span><span>BioQuant</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Team#Bioquant"><span><span>BioQuant</span></span></a></li>
Line 32: Line 374:
<ul class="DropDownMenu" id="MB1-DDM1">
<ul class="DropDownMenu" id="MB1-DDM1">
<li><a href="https://2008.igem.org/Team:Heidelberg/Project"><span><span>Overall Project</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Project"><span><span>Overall Project</span></span></a></li>
 +
<li><a href="https://2008.igem.org/Team:Heidelberg/Notebook/material"><span><span>Material & Methods</span></span></a>
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Sensing"><span><span>Sensing</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Sensing"><span><span>Sensing</span></span></a></li>
-
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Killing_I"><span><span>Killing I</span></span></a></li>
+
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Killing_I"><span><span>Killing I - Phages</span></span></a></li>
-
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Killing_II"><span><span>Killing II</span></span></a></li>
+
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Killing_II"><span><span>Killing II - Colicin</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Visualization"><span><span>Visualization</span></span></a></li>
<li><a href="https://2008.igem.org/Team:Heidelberg/Project/Visualization"><span><span>Visualization</span></span></a></li>
</ul>
</ul>
Line 50: Line 393:
</li>
</li>
<li>
<li>
-
<a href="https://2008.igem.org/Team:Heidelberg/Chemotaxis" style="color: white">Modeling<!--[if gt IE 6]><!--></a><!--<![endif]-->
+
<a href="https://2008.igem.org/Team:Heidelberg/Modeling" style="color: white">Modeling<!--[if gt IE 6]><!--></a><!--<![endif]-->
<!--[if lt IE 7]><table border="0" cellpadding="0" cellspacing="0"><tr><td><![endif]-->
<!--[if lt IE 7]><table border="0" cellpadding="0" cellspacing="0"><tr><td><![endif]-->
<ul class="DropDownMenu" id="MB1-DDM3">
<ul class="DropDownMenu" id="MB1-DDM3">
-
<li><a href="https://2008.igem.org/Team:Heidelberg/Modeling/Chemotaxis"><span><span>Chemotaxis - Killing</span></span></a></li>
+
<li><a href="https://2008.igem.org/Team:Heidelberg/Modeling"><span><span>Overview</span></span></a></li>
-
<li><a href="https://2008.igem.org/Team:Heidelberg/Modeling/Phage"><span><span>Phage Dynamics - model</span></span></a></li>
+
<li><a href="https://2008.igem.org/Team:Heidelberg/Modeling/Chemotaxis"><span><span>Chemotaxis-Colicin</span></span></a></li>
 +
<li><a href="https://2008.igem.org/Team:Heidelberg/Modeling/Phage"><span><span>Phage Dynamics model</span></span></a></li>
</ul>
</ul>
<!--[if lte IE 6]></td></tr></table></a><![endif]-->
<!--[if lte IE 6]></td></tr></table></a><![endif]-->
</li>
</li>
<li>
<li>
-
<a href="https://2008.igem.org/Team:Heidelberg/Notebook/Sensing_Group/Notebook" style="color: white">Notebook<!--[if gt IE 6]><!--></a><!--<![endif]-->
+
<a href="https://2008.igem.org/Team:Heidelberg/Notebook/Overview" style="color: white">Notebook<!--[if gt IE 6]><!--></a><!--<![endif]-->
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<ul class="DropDownMenu" id="MB1-DDM5">
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==Killing II - Notebook==
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In progress...
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==Colicins - Notebook==
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 +
[[Team:Heidelberg/Notebook/Killing_II/1stweek | 1st Week (08/04/2008 - 08/10/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/2ndweek | 2nd Week (08/11/2008 - 08/17/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/3rdweek | 3rd Week (08/18/2008 - 08/24/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/4thweek | 4th Week (08/25/2008 - 08/31/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/5thweek | 5th Week (09/01/2008 - 09/07/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/6thweek | 6th Week (09/08/2008 - 09/14/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/7thweek | 7th Week (09/15/2008 - 09/21/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/8thweek | 8th Week (09/22/2008 - 09/28/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/9thweek | 9th Week (09/29/2008 - 10/05/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/10thweek | 10th Week (10/06/2008 - 10/12/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/11thweek | 11th Week (10/13/2008 - 10/19/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/12thweek | 12th Week (10/20/2008 - 10/26/2008) ]]<br>
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[[Team:Heidelberg/Notebook/Killing_II/13thweek | 13th Week (10/27/2008 - 11/02/2008) ]]<br>
 +
 
 +
==Colicins - Scripts==
 +
===Matlab===
 +
Data evaluation of colicin activity tests:
 +
*[[Media:colicin_activity_081020.m]]
 +
*[[Media:one_plate_colicin.m]]
 +
*[[Media:colicin_test.m]]
 +
*[[Media:colicin_one_plate.m]]
 +
*[[Media:colicin_activity_system.m]]
 +
*[[Media:colicin_activity_system_lysis.m]]
 +
*[[Media:colicin_char.m]]
 +
Data evaluation of sender activiy tests:
 +
*[[Media:sendertest.m]]
 +
*[[Media:one_plate.m]]
 +
*[[Media:timerow.m]]
 +
*[[Media:timerow_maxi.m]]
 +
 
 +
===Perl===
 +
Data preprocessing of overnight measurements in tecan plate reader data
 +
*[[Media: Tecan_scripts.zip]]
 +
Converting tab separated table to wiki table
 +
*[[Media: convert_2_wikitable.zip]]

Latest revision as of 02:48, 29 October 2008


Contents

Colicins - Notebook

1st Week (08/04/2008 - 08/10/2008)
2nd Week (08/11/2008 - 08/17/2008)
3rd Week (08/18/2008 - 08/24/2008)
4th Week (08/25/2008 - 08/31/2008)
5th Week (09/01/2008 - 09/07/2008)
6th Week (09/08/2008 - 09/14/2008)
7th Week (09/15/2008 - 09/21/2008)
8th Week (09/22/2008 - 09/28/2008)
9th Week (09/29/2008 - 10/05/2008)
10th Week (10/06/2008 - 10/12/2008)
11th Week (10/13/2008 - 10/19/2008)
12th Week (10/20/2008 - 10/26/2008)
13th Week (10/27/2008 - 11/02/2008)

Colicins - Scripts

Matlab

Data evaluation of colicin activity tests:

Data evaluation of sender activiy tests:

Perl

Data preprocessing of overnight measurements in tecan plate reader data

Converting tab separated table to wiki table

Retrieved from "http://2008.igem.org/Team:Heidelberg/Notebook/Killing_II/Notebook"