Team:Harvard/Parts/Tempsenseci
From 2008.igem.org
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The thermoinducible cI lambda system uses cI857 (a mutant form of cI from [http://www.addgene.org/pgvec1?f=c&vectorid=5079&cmd=genvecmap&dim=800&format=html&mtime=1188314819| pGW7] purchased from [http://www.atcc.org/ATCCAdvancedCatalogSearch/ProductDetails/tabid/452/Default.aspx#40554| ATCC]) to regulate expression of genes under the control of the lambda promoter. The cI857 repressor is repressed by thermal denaturation. Activity of cI857 begins to decrease around 30 ºC and is fully denatured by around 42 ºC (Leipold et al., 1994). Thus transcription of the gene under the control of the lambda promoter can be induced by increasing the temperature from 30 ºC to 37 ºC-40 ºC. | The thermoinducible cI lambda system uses cI857 (a mutant form of cI from [http://www.addgene.org/pgvec1?f=c&vectorid=5079&cmd=genvecmap&dim=800&format=html&mtime=1188314819| pGW7] purchased from [http://www.atcc.org/ATCCAdvancedCatalogSearch/ProductDetails/tabid/452/Default.aspx#40554| ATCC]) to regulate expression of genes under the control of the lambda promoter. The cI857 repressor is repressed by thermal denaturation. Activity of cI857 begins to decrease around 30 ºC and is fully denatured by around 42 ºC (Leipold et al., 1994). Thus transcription of the gene under the control of the lambda promoter can be induced by increasing the temperature from 30 ºC to 37 ºC-40 ºC. | ||
- | + | ===BBa_K098995=== | |
This is a thermosensitive cI inducible system driven by a strong promoter. | This is a thermosensitive cI inducible system driven by a strong promoter. | ||
<div style="text-indent:0pt;color:black">[[Image:122.png|thumb|650px|center|BBa_K098995]]</div> | <div style="text-indent:0pt;color:black">[[Image:122.png|thumb|650px|center|BBa_K098995]]</div> | ||
- | + | ===BBa_K098993=== | |
This is a thermosensitive cI inducible system driven by a weak promoter. | This is a thermosensitive cI inducible system driven by a weak promoter. | ||
[[Image:123.png|thumb|650px|center|BBa_K098993]] | [[Image:123.png|thumb|650px|center|BBa_K098993]] | ||
- | == | + | ==Induction Test for Thermosensitive cI Systems with GFP Reporters== |
An induction test was designed to test the inducibility of the heat sensitive cI systems. Two constructs were made: | An induction test was designed to test the inducibility of the heat sensitive cI systems. Two constructs were made: | ||
- | + | ===BBa_K098988=== | |
This is a thermosensitive cI inducible system driven by a strong promoter and with a GFP indicator. | This is a thermosensitive cI inducible system driven by a strong promoter and with a GFP indicator. | ||
[[Image:124.png|thumb|650px|center|BBa_K098988]] | [[Image:124.png|thumb|650px|center|BBa_K098988]] | ||
- | + | ===BBa_K098988=== | |
This is a thermosensitive cI inducible system driven by a weak promoter and with a GFP indicator. | This is a thermosensitive cI inducible system driven by a weak promoter and with a GFP indicator. | ||
[[Image:125.png|thumb|650px|center|BBa_K098987]] | [[Image:125.png|thumb|650px|center|BBa_K098987]] | ||
- | + | ===Experimental Design=== | |
[[Image:Thermo.png|thumb|150px|Thermo Induction Experimental Design]]<br> | [[Image:Thermo.png|thumb|150px|Thermo Induction Experimental Design]]<br> | ||
Starter cultures of E. coli with [http://partsregistry.org/wiki/index.php?title=Part:BBa_K098988| BBa_K098988] and [http://partsregistry.org/wiki/index.php?title=Part:BBa_K098987| BBa_K098987] were grown overnight. They were then diluted and grown to OD 0.2 before separation into induced (40 ºC) and uninduced cultures (30 ºC). OD and GFP readings were taken at time 0, 2, and 4 hours. Additionally, after diluting T=2hrs samples to OD 0.2 for accurate GFP measurements, samples were further diluted 1000x, induced (or not induced) again, and placed back in their respective incubators until the end of the experiment, when OD and GFP readings were taken. | Starter cultures of E. coli with [http://partsregistry.org/wiki/index.php?title=Part:BBa_K098988| BBa_K098988] and [http://partsregistry.org/wiki/index.php?title=Part:BBa_K098987| BBa_K098987] were grown overnight. They were then diluted and grown to OD 0.2 before separation into induced (40 ºC) and uninduced cultures (30 ºC). OD and GFP readings were taken at time 0, 2, and 4 hours. Additionally, after diluting T=2hrs samples to OD 0.2 for accurate GFP measurements, samples were further diluted 1000x, induced (or not induced) again, and placed back in their respective incubators until the end of the experiment, when OD and GFP readings were taken. | ||
- | + | ===Results=== | |
- | Induction of GFP expression was observed at both 2 and 4 hours after moving samples to 40 ºC. | + | Induction of GFP expression was observed at both 2 and 4 hours after moving samples to 40 ºC. While levels of GFP expression in the GFP+ control ([http://partsregistry.org/wiki/index.php?title=Part:BBa_K098991| BBa_K098991]) went down in the samples at 40 ºC, levels in the inducible systems increased slightly. Note that the ''absolute levels'' of GFP expression do not increase much relative to 30 ºC, but the increase in GFP expression is significantly different behavior from the decrease in the GFP+control. We hypothesize that elevated temperature affects the GFP expression (e.g. by disrupting protein folding), and that even the small increase in GFP expression with our systems indicates effective induction. However, this does suggest that such a system is not optimal for inducing the expressing of heat-sensitive proteins. A slight decrease in baseline fluorescence was also observed in negative control GFP- cells ([http://partsregistry.org/wiki/index.php?title=Part:BBa_K098981| BBa_K098981]). <br> |
///mak into coherent link //// PDF version: [https://static.igem.org/mediawiki/2008/c/ce/CIts_system.pdf] | ///mak into coherent link //// PDF version: [https://static.igem.org/mediawiki/2008/c/ce/CIts_system.pdf] |
Revision as of 01:09, 30 October 2008
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