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Team:Heidelberg/Modeling/Chemotaxis
From 2008.igem.org
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* [[Team:Heidelberg/Modeling/Chemotaxis/simulation1 | 4-PDEs with killer in corner and prey evenly distributed]] | * [[Team:Heidelberg/Modeling/Chemotaxis/simulation1 | 4-PDEs with killer in corner and prey evenly distributed]] | ||
* [[Team:Heidelberg/Modeling/Chemotaxis/simulation2 | 5-PDEs with killer in corner and prey evenly distributed]] | * [[Team:Heidelberg/Modeling/Chemotaxis/simulation2 | 5-PDEs with killer in corner and prey evenly distributed]] | ||
| - | * [[Team:Heidelberg/Modeling/Chemotaxis/simulation3 | 5-PDEs with killer in corner and prey evenly distributed | + | * [[Team:Heidelberg/Modeling/Chemotaxis/simulation3 | 5-PDEs with killer in corner and prey evenly distributed, but 1/1000 AI-2 production rate]] |
| - | * [[Team:Heidelberg/Modeling/Chemotaxis/simulation4 | 5-PDEs with killer in corner and prey evenly distributed | + | * [[Team:Heidelberg/Modeling/Chemotaxis/simulation4 | 5-PDEs with killer in corner and prey evenly distributed, but 4-fold chemotactic activity towards AI-2]] |
* [[Team:Heidelberg/Modeling/Chemotaxis/simulation5 | 5-PDEs with prey in center and killer evenly distributed around them]] | * [[Team:Heidelberg/Modeling/Chemotaxis/simulation5 | 5-PDEs with prey in center and killer evenly distributed around them]] | ||
Revision as of 07:13, 29 October 2008
Chemotaxis - Killing Model
Our detailed documentation "Model for Sensing Network and the Production of Colicins as the Killing Mechanism" includes the following information:
- Introduction into the biological sytem
- Chemotaxis model
- Parameter estimation
- Numerical methods
- Results
- Discussion
You can download the documentation here and the summary of the modeling project can be downloaded here.
Simulation movies
- 4-PDEs with killer in corner and prey evenly distributed
- 5-PDEs with killer in corner and prey evenly distributed
- 5-PDEs with killer in corner and prey evenly distributed, but 1/1000 AI-2 production rate
- 5-PDEs with killer in corner and prey evenly distributed, but 4-fold chemotactic activity towards AI-2
- 5-PDEs with prey in center and killer evenly distributed around them
