MODELING:
MISSING REACTION:
We forgot to take into account one reaction, cI*’s degradation (cI* -» 0). Now it has been added to the model.
ASSUMPTIONS:
There were some changes in our assumptions.
CHECK:
- It is suggested to check more in-depth if nickel natural usage in the cell can really be considered irrelevant for our experiment (assumption 5).
- Daniela identified the metabolic pathways which involve nickel in E. coli, the link is on assumption 5.
MODEL:
The first simulation in Matlab was generated. It worked! Everyone should test it and correct or suggest anything necessary.
TO-DO LIST:
Defining parameters is our topmost priority (reaction rates, kinetic constants and concentrations). |
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