Team:Purdue/Tools and References

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Useful References

Milk Research

  1. A general overview of milk and how factors affect its lifespan and production, [http://www.ilri.org/InfoServ/Webpub/Fulldocs/ILCA_Manual4/Toc.htm#TopOfPage].
  2. University of Guelph Overview of Milk: [http://www.foodsci.uoguelph.ca/dairyedu/home.html].
  3. Investigations into the activity of enzymes produced by spoilage-causing bacteria: a possible basis for improved shelf-life estimation: Braun et al. Food Microbiology. v.16 Pgs. 531-540. 1999.
  4. Microbial and biochemical spoilage of foods: An overview. intVeld, JHJH. International Journal of Food Microbiology. v.33 Pgs. 1-18. 1996.
  5. pH & gene expression old review (1993), but useful. [http://www.blackwell-synergy.com/doi/pdf/10.1111/j.1365-2958.1993.tb01198.x?cookieSet=1]
  6. Effect of Temperature, Pressure, and CO2 Concentration on the pH of milk: Ma et al. Journal of Dairy Science. v.86 Pgs. 3822-3830. 2003. [http://jds.fass.org/cgi/content/full/86/12/3822]
  7. Dairy Science and Technology. 2nd ed: Walstra et al. 2006 CRC Press.

UV Research

  1. An overview of the SOS genes, [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1174825].
  2. A related article, examining response times and mechanisms of SOS induction by attaching promoters to GFP: [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1151601].
  3. Web of Science page for "Binding of Photolyase of E. coli to UV-Damaged DNA" [http://www2.lib.purdue.edu:2149/full_record.do?product=WOS&search_mode=AdvancedSearch&qid=8&SID=3F4ocg8a@Agl43ijgDe&page=35&doc=344]
  4. Sequences of the E. coli Photolyase gene and protein: [http://www2.lib.purdue.edu:2479/cgi/reprint/259/9/6033]
  5. 1987 "Induction of phr gene expression by irradiation of ultraviolet light in Escherichia coli." [http://www.ncbi.nlm.nih.gov/pubmed/2823069?ordinalpos=3&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum]
  6. 1987 "Induction of phr gene expression by pyrimidine dimers in Escherichia coli." [http://www.ncbi.nlm.nih.gov/pubmed/3313446?ordinalpos=2&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum]
  7. 1989 "The LexA protein does not bind specifically to the two SOS box-like sequences immediately 5' to the phr gene." [http://www.ncbi.nlm.nih.gov/pubmed/2509902?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&linkpos=2&log$=relatedarticles&logdbfrom=pubmed]
  8. 1995 "Promoters of the phr gene in E. coli K-12": Ma, Chuping and Claud S. Rupert. Molecular and General Genetics. v.248 Pgs. 52-58. 1995.
  9. 2001 "Induction of phr gene expression in E. coli strain KY706/pPL-1 by He-Ne laser (632.8 nm) irradiation." [http://www.ncbi.nlm.nih.gov/pubmed/11470570?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum]
  10. "Detecting UV damage in single DNA molecules by AFM" [http://www2.lib.purdue.edu:2149/full_record.do?product=WOS&search_mode=CombineSearches&qid=3&SID=1A8JLc54jOBnIioE2C3&page=1&doc=6]
  11. Review article 1. [http://www2.lib.purdue.edu:2164/content/7l83vj6244wq8164/fulltext.pdf]
  12. "Crystal Structure of thermostable DNA photolyase: pyrimidine dimer recognition mechanism." [http://www2.lib.purdue.edu:2111/sici?sici=0027-8424%282001%2998%3A24%3C13560%3ACSOTDP%3E2.0.CO%3B2-B&origin=ISI&cookieSet=1]
  13. Review article 2. "Light-driven enzymatic catalysis of DNA repair: a review of recent biophysical studies on photolyase". [http://www2.lib.purdue.edu:6624/purdue?&url_ver=Z39.88-2004&url_ctx_fmt=info:ofi/fmt:kev:mtx:ctx&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.atitle=Light-driven+enzymatic+catalysis+of+DNA+repair%3A+a+review+of+recent+biophysical+studies+on+photolyase&rft.auinit=S&rft.aulast=Weber&rft.date=2005&rft.epage=23&rft.genre=article&rft.issn=0005-2728&rft.issue=1&rft.spage=1&rft.stitle=BBA-BIOENERGETICS&rft.title=BIOCHIMICA+ET+BIOPHYSICA+ACTA-BIOENERGETICS&rft.volume=1707&rfr_id=info:sid/www.isinet.com:WoK:WOS&rft_id=info:doi/10.1016%2Fj.bbabio.2004.02.010]

UV Basics and Skin Cancer Statistics

  1. UV varies on any given day. What is the UV index? EPA definition and UV map predictions for US [http://www.epa.gov/sunwise/uvindex.html]
  2. Skin Cancer Stats from the American Academy of Dermatology [http://www.aad.org/media/background/factsheets/fact_skincancer.html]

Useful Tools

  1. Go through Purdue Libraries [http://www.lib.purdue.edu/] to get to the research databases. I prefer Web of Science.
  2. Wiley Protocols in Molecular Biology. Link will only work on Purdue Recognized Computers. [http://www.mrw.interscience.wiley.com/emrw/9780471142720/cp/cpmb/toc]
  3. Biobricks Parts Registry [http://partsregistry.org/Main_Page]


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