Team:Valencia/Project/Lab work
From 2008.igem.org
1.- Construction of a Liquid Culture Calorimeter (LCC).
MaterialsTo build your own LCC you need the following materials:
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Method
Building your own calorimeter system is easy. You just need to follow the next steps:
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Characterization results
After trying different combinations of shaking speed, flask tilt and culture volume, we obtained a combination of conditions suitable for the experiment (allowing optimal respiration of yeast culture): 270 rpm, approximately 10 º tilt and 100 ml in a 1L flask, with the thermocouple measuring submerged in the liquid.
In these conditions, the 4 LCCs were characterized with water at the temperature of the future experiments, in order to establish the range of heat losses to the environment of the system. The results are shown in the following figures:
To show how room temperature can affect temperature inside the LCCs, we repeated the experiment producing a variation in room temperature. The result was:
Troubleshooting
We have encountered some adversities regarding Armaflex©. This material is sensitive to mechanical damage and especially to water. No matter how careful we were, we found the insulation capacity of our system had drastically decreased after a few weeks.
The main problem was cleaning the LCCs, since it was very difficult for them not to get wet. We tried different protocols, such as covering them with aluminum foil and sealing with parafilm or using funnels, but the water got inside anyway. Every time the temperatures were falling more than usual, we had to stop the experiment, remove Armaflex© cover and use a hair dryer to dry it.
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With regard to the LCCs characterization, we have also gone through different conditions. The first problem we encountered was the apparition of sudden periodic oscillations of temperature in some of the experiments. The best explanation was that water was somehow coming in contact with the thermocouple, which was placed in the upper part of the flask at that time. To try and solve that, we reduced the liquid volume, but the problem persisted. After checking that this phenomenon was not produced when the shaking was stopped, it became clear the oscillations were related to it, probably because of a condensation process. |
The solution to this problem appeared, as usual, when we were not looking for it. In order to provide more oxygen to the culture, we increased the shaking speed and the flask tilt in an experiment with water. Surprisingly, the periodic oscillations disappeared and the temperature not only did not fall so much, but slightly increased. We found we could regulate the temperature with these two factors; therefore, we adjusted them so as to obtain almost stable temperature with a high shaking speed suitable for culture growth.
Another condition we changed was the position of the thermocouple inside the flask. They had been always placed in the upper part, having no contact with the liquid because of contamination reasons. However, our engineer team members suggested it would be better for the thermocouples to be submerged in the liquid. After carrying out an experiment, we saw there was not significant difference between both positions and none of them resulted in contamination either. Since the data obtained is more exact with the thermocouple submerged, we decided to keep them that way.