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Team:Paris/Modeling/Molecular Reactions
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| - | '''The System we are studying is the "Core System" ''' (see [[Team:Paris/Modeling/PRECISERLADRESSE|PRECISERLADRESSE]]) that we can represent in the following, with all alternatives (''pFlhDC/pTet'' ; ''TetR/EnvZ/OmpR<sup>*</sup>'') : [[Image: | + | '''The System we are studying is the "Core System" ''' (see [[Team:Paris/Modeling/PRECISERLADRESSE|PRECISERLADRESSE]]) that we can represent in the following, with all alternatives (''pFlhDC/pTet'' ; ''TetR/EnvZ/OmpR<sup>*</sup>'') : [[Image:CoreSystemf5.jpg|thumb|center|The Full System<br>The interaction surrounded in red (f5) is the one of the detailed example]] |
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<br><br> | <br><br> | ||
| - | {| border="1" width="100%" style="text-align: | + | {| border="1" width="100%" style="text-align: center" |
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| - | | width="75%" | | + | | width="75%" | '''Complexation Reactions''' <br> |
| - | The double triangle (|><|) is a symbol for complexations : <br><br> | + | The double triangle (|><|) is a symbol for complexations : <br> |
| + | [[Image:compl.jpg|110px]] means ''n<sub>1</sub>'' molecules of ''FlhDC'' complexed with a ''pFliA'' promoter<br><br> | ||
<html><iframe height="300" width="700" src="https://static.igem.org/mediawiki/2008/3/3a/Complexation_Reactions.pdf"></iframe></html> | <html><iframe height="300" width="700" src="https://static.igem.org/mediawiki/2008/3/3a/Complexation_Reactions.pdf"></iframe></html> | ||
| - | [[Image:compl.jpg|110px]] means ''n<sub>1</sub>'' molecules of ''FlhDC'' complexed with a ''pFliA'' promoter | + | | width="25%" | '''On the Example''' <br> |
| - | | width="25%" | '''On the Example''' [[Image: | + | The complexation of ''FlhDC'' on ''pFliL'' : <br> |
| + | [[Image:DCiLcompl.jpg]] | ||
| + | The complexation of ''FliA'' on ''pFliL'' : <br> | ||
| + | [[Image:AiLcompl.jpg]] | ||
| + | |||
| + | |- | ||
| + | | width="75%" | '''Production Reactions''' <br> | ||
| + | The double triangle (|><|) is a symbol for complexations : <br> | ||
| + | [[Image:compl.jpg|110px]] means ''n<sub>1</sub>'' molecules of ''FlhDC'' complexed with a ''pFliA'' promoter<br><br> | ||
| + | |||
| + | <html><iframe height="300" width="700" src="https://static.igem.org/mediawiki/2008/e/ef/Production_Reactions.pdf"></iframe></html> | ||
| + | |||
| + | | width="25%" | '''On the Example''' <br> | ||
| + | The production of ''FP1'' by ''FlhDC|><|pFliL'' and ''FliA|><|pFliL'' : <br> | ||
| + | [[Image:bFP1.jpg]] | ||
| + | |||
| + | |- | ||
| + | | width="75%" | '''Degradation/Dilution Reactions''' <br> | ||
| + | The double triangle (|><|) is a symbol for complexations : <br> | ||
| + | [[Image:compl.jpg|110px]] means ''n<sub>1</sub>'' molecules of ''FlhDC'' complexed with a ''pFliA'' promoter<br><br> | ||
| + | |||
| + | <html><iframe height="300" width="700" src="https://static.igem.org/mediawiki/2008/f/f7/Degradation_Dilution.pdf"></iframe></html> | ||
| + | |||
| + | | width="25%" | '''On the Example''' <br> | ||
| + | The disappearance of ''FP1'' because of its degradation/dilution : <br> | ||
| + | [[Image:dFP1.jpg]] | ||
| + | |||
|} | |} | ||
Revision as of 19:01, 26 October 2008
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Molecular Reactions
We starts from elementary reactions that are "exhaustives" in the sense that every steps of the system is described. Each of those reactions has to be "mathematically interpreted", in a model (see the model) that accounts for the important phenomenon, and in the same time allows us to find experimentally (see the protocol) every involved parameters.
 The interaction surrounded in red (f5) is the one of the detailed example
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