Team:Valencia/Parts

From 2008.igem.org

(Difference between revisions)
Line 7: Line 7:
<div style=" width:94%; margin: 0 auto;">
<div style=" width:94%; margin: 0 auto;">
-
'''Ucp1'''
+
==Ucp1==
-
'''General information'''
+
===General information===
Ucp1 is a gene which encodes for UCP1 protein.
Ucp1 is a gene which encodes for UCP1 protein.
Line 44: Line 44:
-
'''Sequence'''
+
===Sequence===
Line 51: Line 51:
-
'''UCP 175 deleted'''
+
==UCP 175 deleted==
Line 88: Line 88:
-
'''Sequence:'''
+
===Sequence:===
[[Image:Sequence UCP 175 deleted.jpg]]
[[Image:Sequence UCP 175 deleted.jpg]]
Line 102: Line 102:
-
'''UCP 76 deleted'''
+
==UCP 76 deleted==
Line 140: Line 140:
-
'''Sequence:'''
+
===Sequence:===
[[Image:Sequence UCP 76 deleted.jpg]]
[[Image:Sequence UCP 76 deleted.jpg]]

Revision as of 13:22, 23 October 2008



Contents

Ucp1

General information

Ucp1 is a gene which encodes for UCP1 protein.

The uncoupling protein UCP1 is a proton carrier characteristic of brown adipose tissue. UCP1 uncouples the respiratory chain of ATP production, converting the metabolic energy in heat.

Function.jpg


UCP1 is a 33kd protein which is exclusively located in the brown adipocites. It is an integral protein present in inner mitocondrial membrane.

The protein has a tripartite structure. The structure displays an around 100 residues region which is three times repeated. Each part encodes for two transmembrane segments and one long hydrophilic loop.The functional carrier unit is an homodimer.

Structure.jpg


The main difference between UCP1 and most of the proteins with a nuclear codification is the lack of the importation targeting to the mitochondria in UCP+ proteins. The condition that determines the mitochondria as the protein target lays in the first loop which protudes in the mitochondrial matrix.

The second loop of the matrix is essential for the insertion of the protein in the inner mitochondrial matrix. Purine nucleotides act as inhibitors of protein activity and esterificated fatty acids act as inductors.


Sequence

Secuencia UCP1.jpg


UCP 175 deleted

The uncoupling protein UCP 175 deleted is a proton carrier which is obtaines from the direct mugenesis of the Ucp1 gene. Ucp 175 has a deletion in the triplet the encodes for the Glycine 175. The mutant shows a generation time and an heat up capacity higher than UCP1. UCP 175 deleted uncouples the respiratory chain of ATP production, converting the metabolic energy in heat. The mutant shows a generation time and an heat up capacity higher than UCP1.

Function.jpg


UCP 175 deleted is a 33kd protein. The protein has a tripartite structure. The structure displays an around 100 residues region which is three times repeated. Each part encodes for two transmembrane segments and one long hydrophilic loop.The functional carrier unit is an homodimer.

Structure.jpg


The main difference between UCP 175 deleted and most of the proteins with a nuclear codification is the lack of the importation targeting to the mitochondria in UCP 175 deleted proteins.

The condition that determines the mitochondria as the protein target lays in the first loop which protudes in the mitochondrial matrix.

The second loop of the matrix is essential for the insertion of the protein in the inner mitochondrial matrix.

That protein is without direct regulation and its generation time depends on the inner activity the protein.


Sequence:

Sequence UCP 175 deleted.jpg

Graphic about the growth of four different strains of Saccharomyces cerevisiae transformed with four kinds of UCP genes:


Creixement.jpg

Y axis = Population in OD (optic density) units. X axis = Time in hours.


UCP 76 deleted

The uncoupling protein UCP 76 deleted is a proton carrier which is obtaines from the direct mugenesis of the Ucp1 gene. Ucp 76 has a deletion in the triplet the encodes for the Glycine 76. The mutant shows a generation time and an heat up capacity higher than UCP1. UCP 76 deleted uncouples the respiratory chain of ATP production, converting the metabolic energy in heat. The mutant shows a generation time and an heat up capacity higher than UCP1.


Function.jpg


UCP 76 deleted is a 33kd protein. The protein has a tripartite structure. The structure displays an around 100 residues region which is three times repeated. Each part encodes for two transmembrane segments and one long hydrophilic loop.The functional carrier unit is an homodimer.

Structure.jpg


The main difference between UCP 76 deleted and most of the proteins with a nuclear codification is the lack of the importation targeting to the mitochondria in UCP 76 deleted proteins.

The condition that determines the mitochondria as the protein target lays in the first loop which protudes in the mitochondrial matrix.

The second loop of the matrix is essential for the insertion of the protein in the inner mitochondrial matrix.

That protein is without direct regulation and its generation time depends on the inner activity the protein.


Sequence:

Sequence UCP 76 deleted.jpg

Graphic about the growth of four different strains of Saccharomyces cerevisiae transformed with four kinds of UCP genes:


Creixement.jpg

Y axis = Population in OD (optic density) units. X axis = Time in hours.