Team:Paris/August 1

From 2008.igem.org

(Difference between revisions)
(List of Strain stocked)
(List of Strain stocked)
Line 118: Line 118:
|align="center"|L104
|align="center"|L104
|align="center"|Strong rbs - lasR activator<br>D129 (BV) - D114 (BI)
|align="center"|Strong rbs - lasR activator<br>D129 (BV) - D114 (BI)
-
|align="center"|[[Image:Part_icon_rbs.png]]
+
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Icon_coding.png]]
|-
|-
|align="center"|S126
|align="center"|S126
-
|align="center"|L107
+
|align="center"|L105
-
|align="center"|Strongest promoter - ECFP<br>D103 (BV) - D131 (BI)
+
|align="center"|Strong promoter - ECFP<br>D123 (BV) - D130 (BI)
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|-   
|-   
|align="center"|S127
|align="center"|S127
-
|align="center"|L108
+
|align="center"|L106
-
|align="center"|Strong promoter -  gfp Tripart<br>D103 (BV) - D130 (BI)
+
|align="center"|Strong promoter -  gfp Tripart<br>D123 (BV) - D131 (BI)
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|-   
|-   
|align="center"|S128
|align="center"|S128
-
|align="center"|L110
+
|align="center"|L107
-
|align="center"|Medium promoter - gfp Tripart<br>D124 (BV) - D131 (BI)
+
|align="center"|Strongest promoter - gfp Tripart<br>D103 (BV) - D131 (BI)
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|-  
|-  
|align="center"|S129
|align="center"|S129
-
|align="center"|L111
+
|align="center"|L108
-
|align="center"|Weak promoter - ECFP<br>D104 (BV) - D130 (BI)  
+
|align="center"|Weak promoter - ECFP<br>D103 (BV) - D130 (BI)  
-
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
+
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]
|-  
|-  
|align="center"|S130
|align="center"|S130
-
|align="center"|L112
+
|align="center"|L110
-
|align="center"|Weak promoter - gfp<br>D104 (BV) - D131 (BI)
+
|align="center"|Medium promoter - gfp<br>D124 (BV) - D131 (BI)
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
|-  
|-  
|align="center"|S131
|align="center"|S131
-
|align="center"|L115
+
|align="center"|L111
-
|align="center"|pLas - ECFP<br>D105 (BV) - D130 (BI)
+
|align="center"|Weak promoter - ECFP<br>D104 (BV) - D130 (BI)
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|-
|-
|align="center"|S132
|align="center"|S132
-
|align="center"|L116
+
|align="center"|L112
-
|align="center"|pLas - gfp Tripart<br>D105 (BV) - D131 (BI)
+
|align="center"|Weak promoter - gfp Tripart<br>D104 (BV) - D131 (BI)
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|-   
|-   
|align="center"|S133
|align="center"|S133
 +
|align="center"|L115
 +
|align="center"|pLas - ECFP <br>D105 (BV) - D130 (BI)
 +
|align="center"|[[Image:Part_icon_reporter.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 +
|-
 +
|align="center"|S134
 +
|align="center"|L116
 +
|align="center"|pLas - gfp Tripart<br>D105 (BV) - D131 (BI)
 +
|align="center"|[[Image:Part_icon_reporter.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 +
|-
 +
|align="center"|S135
|align="center"|L117
|align="center"|L117
-
|align="center"|yfp - Double Terminator <br>D125 (FV) - D117 (FI)
+
|align="center"|yfp - Double Terminator<br>D125 (FV) - D117 (FI)
|align="center"|[[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]]
|-
|-
-
|align="center"|S134
+
|align="center"|S136
|align="center"|L118
|align="center"|L118
-
|align="center"|rfp - Double Terminator<br>D125 (FV) - D121 (FI)
+
|align="center"|rfp - Double Terminator<br>D125 (FV) - D117 (FI)
|align="center"|[[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]]
|-
|-
-
|align="center"|S135
+
|align="center"|S137
|align="center"|L119
|align="center"|L119
-
|align="center"|lasR activator + LVA - Double Terminator<br>D125 (FV) - D113 (FI)
+
|align="center"|LasR activator + LVA - Double terminator<br>D125 (FV) - D113 (FI)
|align="center"|[[Image:Icon_coding.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]]
|align="center"|[[Image:Icon_coding.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]]
|-
|-
-
|align="center"|S136
+
|align="center"|S138
|align="center"|L121
|align="center"|L121
-
|align="center"|Strong promoter - gfp tripart<br>D106 (BV) - D130 (BI)
+
|align="center"|Strong promoter - gfp Tripart<br>D106 (BV) - D130 (BI)
-
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
+
|align="center"|[[Image:Part_icon_reporter.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|-
|-
-
|align="center"|S137
+
|align="center"|S139
|align="center"|L124
|align="center"|L124
-
|align="center"|Strongest RBS - rfp<br>D102 (BV) - D122 (BI)
+
|align="center"|Strongest rbs - gfp<br>D102 (BV) - D122 (BI)
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]]
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]]
|-
|-
-
|align="center"|S138
+
|align="center"|S140
|align="center"|L125
|align="center"|L125
-
|align="center"|Strongest RBS - yfp<br>D102 (BV) - D118 (BI)
+
|align="center"|Strongest rbs - yfp<br>D102 (BV) - D118 (BI)
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]]
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]]
|}
|}

Revision as of 14:30, 5 August 2008

← Yesterday

↓ Calendar ↑

Tomorrow →


Contents

MiniPreps

Conditions

  • Use of Quiagen's protocol on all the clones cultivated on the 31th.
  • Preparation of 50µl of minipreps in water.


List of Minipreps

Name Biobricks Description
MP L102 Strong rbs - YFP
D129 (BV) - D118 (BI)
Part icon rbs.pngPart icon reporter.png
MP L103 Strong rbs - GFP
D129 (BV) - D122 (BI)
Part icon rbs.pngPart icon reporter.png
MP L104 Strong rbs - lasR activator
D129 (BV) - D114 (BI)
Part icon rbs.pngIcon coding.png
MP L105 Strong promoter - ECFP
D123 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L106 Strong promoter - gfp Tripart
D123 (BV) - D131 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L107 Strongest promoter - ECFP
D103 (BV) - D131 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L108 Strong promoter - gfp Tripart
D103 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L110 Medium promoter - gfp Tripart
D124 (BV) - D131 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L111 Weak promoter - ECFP
D104 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L112 Weak promoter - gfp
D104 (BV) - D131 (BI)
Part icon regulatory.pngPart icon reporter.png
MP L115 pLas - ECFP
D105 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L116 pLas - gfp Tripart
D105 (BV) - D131 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L117 yfp - Double Terminator
D125 (FV) - D117 (FI)
Part icon reporter.pngPart icon terminator.pngPart icon terminator.png
MP L118 rfp - Double Terminator
D125 (FV) - D121 (FI)
Part icon reporter.pngPart icon terminator.pngPart icon terminator.png
MP L119 lasR activator + LVA - Double Terminator
D125 (FV) - D113 (FI)
Icon coding.pngPart icon terminator.pngPart icon terminator.png
MP L121 Strong promoter - gfp tripart
D106 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
MP L124 Strongest RBS - rfp
D102 (BV) - D122 (BI)
Part icon rbs.pngPart icon reporter.png
MP L125 Strongest RBS - yfp
D102 (BV) - D118 (BI)
Part icon rbs.pngPart icon reporter.png

Stock Glycerol

Protocol

  • 1mL glycerol
  • 1mL culture in LB


List of Strain stocked

Strain Ligation Biobricks Description
S123 L102 Strong rbs - YFP
D129 (BV) - D118 (BI)
Part icon rbs.pngPart icon reporter.png
S124 L103 Strong rbs - GFP
D129 (BV) - D122 (BI)
Part icon rbs.pngPart icon reporter.png
S125 L104 Strong rbs - lasR activator
D129 (BV) - D114 (BI)
Part icon rbs.pngIcon coding.png
S126 L105 Strong promoter - ECFP
D123 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S127 L106 Strong promoter - gfp Tripart
D123 (BV) - D131 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S128 L107 Strongest promoter - gfp Tripart
D103 (BV) - D131 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S129 L108 Weak promoter - ECFP
D103 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.png[[Image:Part_icon_terminator.png]
S130 L110 Medium promoter - gfp
D124 (BV) - D131 (BI)
Part icon regulatory.pngPart icon reporter.png
S131 L111 Weak promoter - ECFP
D104 (BV) - D130 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S132 L112 Weak promoter - gfp Tripart
D104 (BV) - D131 (BI)
Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S133 L115 pLas - ECFP
D105 (BV) - D130 (BI)
Part icon reporter.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S134 L116 pLas - gfp Tripart
D105 (BV) - D131 (BI)
Part icon reporter.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S135 L117 yfp - Double Terminator
D125 (FV) - D117 (FI)
Part icon reporter.pngPart icon terminator.pngPart icon terminator.png
S136 L118 rfp - Double Terminator
D125 (FV) - D117 (FI)
Part icon reporter.pngPart icon terminator.pngPart icon terminator.png
S137 L119 LasR activator + LVA - Double terminator
D125 (FV) - D113 (FI)
Icon coding.pngPart icon terminator.pngPart icon terminator.png
S138 L121 Strong promoter - gfp Tripart
D106 (BV) - D130 (BI)
Part icon reporter.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
S139 L124 Strongest rbs - gfp
D102 (BV) - D122 (BI)
Part icon rbs.pngPart icon reporter.png
S140 L125 Strongest rbs - yfp
D102 (BV) - D118 (BI)
Part icon rbs.pngPart icon reporter.png

Transformations

Protocol

use of TOP10 Chemically competent cells

  • Defroze competent cells on ice during 5'
  • Add 5µl of DNA Ligation in 50µL of competent bacterias (or 1µL for the positive control puc19)
  • Incubate 30' on ice
  • Heat-shock the cells during 30" at 42°C without shaking
  • Put 2' on ice
  • Add 250µL of pre-warmed SOC medium (4°C)
  • Incubate 1h at 37°C under shaking (225rpm)
  • Spin at 5.000rpm during 30"
  • Remove 150µL of supernatant
  • Resuspent the pellet in the 150µL left
  • Spread on adequated plates
  • Incubate O/N at 37°C


List of transformation

Name Description Biobrick
L100 RBS-TetR-ECFP Part icon rbs.pngIcon coding.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
L101 RBS-tetR-GFP tripart Part icon rbs.pngIcon coding.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
L113 pBAD-ECFP Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
L114 pBAD-GFP Part icon regulatory.pngPart icon reporter.png
L120 ptet-ECFP Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
L122 RBS-lasI-ECFP Part icon rbs.pngIcon coding.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png
L123 RBS-lasI-GFP-ter Part icon rbs.pngIcon coding.pngPart icon reporter.pngPart icon terminator.png
L126 RBS-lasR-LVA Part icon rbs.pngIcon coding.png