Team:KULeuven/Interesting Reads

From 2008.igem.org

• Home
• Reports
• Calendar

• Project abstract
• Meet the team
• Leave a message
• Mail us

• The Team
  Research Labs and Groups Students Instructors Advisors Pictures
• The Project
  Summary Components

  Input Output Filter InverTimer Reset Cell Death Memory

  Safety End Evaluation Literature Brainstorm
• Ethics
  Introduction Three A's

  Defining the three A's Developments in modern physics Developments in biology

  Concerns & Issues

  Defining synthetic biology A framework Concerns Issues The need for answers

  Biological Robotics

  KULeuven iGEM 2008 project Biological robotics

  Afterword References
• Submitted Parts
  Sandbox
• Modeling
  Overview Kinetic Constants Components

  Output Filter InverTimer Reset Cell Death Memory

  Full Model Sensitivity Analysis Multi-cell Model Diffusion
• Data Analysis
  Overview New Parts

  GFP (LVA-tag) Other

  Components

  Input Output Other
• Software
  Multi-cell Toolbox Simbiology2LaTeX Toolbox
• Notebook
  Protocols Reports

  Daily Weekly

  Lab Data

  Freezer Primers Ligation

  Tools Press Acknowledgments

Interesting reads

Teaching resources

• [http://openwetware.org/wiki/Imperial_College/Courses/Spring2008/Synthetic_Biology Imperial College Introduction to Synthetic Biology Spring 2008]
• [http://openwetware.org/wiki/Imperial_College/Courses/Spring2008/Synthetic_Biology/Computer_Modelling_Practicals Imperial College Computer Modelling Practicals Spring 2008]
• [http://openwetware.org/wiki/Intertech:iSB2008 Valencia Introduction to Synthetic Biology 2008]
• Berkeley course on Synthetic Biology
• [http://www.openwetware.org/wiki/Harvard:Synthetic_Biology_Nanocourse/2007 Harvard Synthetic Biology Nanocourse 2007]

Software resources

• [http://en.wikipedia.org/wiki/Wikipedia:Tutorial A wiki tutorial that can be very useful]
  • [http://www.mediawiki.org/wiki/Help:Contents MediaWiki Help Pages]
  • [http://en.wikipedia.org/wiki/Help:Contents Wikipedia Help Pages (more extensive than MediaWiki)]
• [http://sbml.org SBML]
• [http://www.systems-biology.org/cd/index.html CellDesigner]

General

• [http://www.nature.com/nature/comics/syntheticbiologycomic/index.html synthetic biology comic]
• [http://gardnerlab.bu.edu/publications/Gardner.TS_PhDThesis_2000.pdf PhD thesis Timothy Gardner (toggle switch!)]

iGEM and BioBricks

• introductory resources on the iGEM competition
• [http://partsregistry.org/wiki/index.php/Help:Team_experience_tutorial iGEM tutorial]
• [http://openwetware.org/wiki/IGEM:IMPERIAL/2006/project/Oscillator/Theoretical_Analyses example of an iGEM model - Imperial 2006]
• wiki of Taipei 2007, interesting links
• [http://openwetware.org/wiki/IGEM:Projects_categorized all previous iGEM projects categorized, feel free to add]

• [http://partsregistry.org/Main_Page Registry of Standard Biological Parts]
• [http://partsregistry.org/Help:IGEM_08_DNA_distribution BioBricks 2008 spring distribution]
• [http://partsregistry.org/Measurement BioBricks measurement]
• [http://openwetware.org/wiki/Parts_characterization parts characterization]
• [http://partsregistry.org/wiki/index.php/Help:Contents BioBricks help]

• PMID 16978856: Chris Voigt 2006 review on synthetic biology parts (sensors, switches etc.) ! very useful to use in tutorials !
• PMID 18410688: BioBrick vectors

Original research papers and reviews

• PMID 10659857
• PMID 10659856
• PMID 15858574
• PMID 17700541
• PMID 16330045
• PMID 18410688
• PMID 16306983

• Recent changes
• What links here
• Related changes
• Special pages
• My preferences

• Printable version
• Permanent link
• Privacy policy
• Disclaimers