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| - | <html> | + | <div id="header">{{Template:Team:Edinburgh/Templates/notebook-entry/header}}</div> |
| - | <head>
| + | |
| - | <title>Edinburgh iGEM 2008</title>
| + | |
| - | <script type="text/javascript">
| + | |
| - | //Drop Down Tabs Menu- Author: Dynamic Drive (http://www.dynamicdrive.com)
| + | |
| - | //Created: May 16th, 07' | + | |
| | | | |
| - | var tabdropdown={
| + | :::: '''[[Edinburgh/7_August_2008|< Previous Entry]]''' |
| - | disappeardelay: 200, //set delay in miliseconds before menu disappears onmouseout
| + | |
| - | disablemenuclick: false, //when user clicks on a menu item with a drop down menu, disable menu item's link?
| + | |
| - | enableiframeshim: 1, //1 or 0, for true or false
| + | |
| | | | |
| - | //No need to edit beyond here////////////////////////
| + | == Week 8 == |
| - | dropmenuobj: null, ie: document.all, firefox: document.getElementById&&!document.all, previousmenuitem:null,
| + | === Friday 8 August 08 === |
| - | currentpageurl: window.location.href.replace("http://"+window.location.hostname, "").replace(/^\//, ""), //get current page url (minus hostname, ie: http://www.dynamicdrive.com/)
| + | |
| | | | |
| - | getposOffset:function(what, offsettype){
| + | * Transformation of L32 (pSB1A2+''crtB''+''crtI'') on '''plates 98-99'''. (HX) |
| - | var totaloffset=(offsettype=="left")? what.offsetLeft : what.offsetTop;
| + | * Plate 94 (BABEL2+''glgC''-mut1,2,3) has white colonies, so can be prepped for minipreps. Plate 95 (pSB1A2+''glgC''-mut1,2) has blue colonies. Because of this, transformation of L31 (''glgC''-mut1,2 to Edinbrick1) has been repeated on '''plates 100-101'''. (HX) |
| - | var parentEl=what.offsetParent;
| + | * Digested ''P<sub>cstA</sub>'' (P54) and Edinbrick1 using Spe1/EcoR1. Ligated as '''L33''', to be transformed tomorrow (OG) |
| - | while (parentEl!=null){
| + | * ''Arabidopsis thaliana'' ''isa1'' and ''isa2'' cDNAs have arrived as well as ''Zea mays'' ''su1'', ''iso2'' and ''iso3''. The ''Arabidopsis'' genes are full of forbidden restriction sites, so it would be best to use the maize genes. Primers will need to be designed. (AH) |
| - | totaloffset=(offsettype=="left")? totaloffset+parentEl.offsetLeft : totaloffset+parentEl.offsetTop;
| + | * PCRed ''cenA'' and ''cex'' with a) KOD polymerase, b) Velocity polymerase separately to make '''P55''' (''cenA'' by KOD), '''P56''' (''cenA'' by Velocity), '''P57''' (''cex'' by KOD) and '''P58''' (''cex'' by Velocity). (Yan) |
| - | parentEl=parentEl.offsetParent;
| + | * Ligated rbs+''dxs'' with rbs+''crtE'' as '''L34''' (pSB1A2+''dxs''+''crtE'') and rbs+''dxs'' with rbs+''lims1'' as '''L35''' (pSB1A2+''dxs''+''lims1''). (Yan) |
| - | }
| + | * M79 sequencing results indicate that M79 is BABEL2+''crtE''. (AH)<br /> |
| - | return totaloffset;
| + | <br /> |
| - | },
| + | |
| | | | |
| - | showhide:function(obj, e, obj2){ //obj refers to drop down menu, obj2 refers to tab menu item mouse is currently over
| + | :::: '''[[Edinburgh/9_August_2008|Next Entry >]]''' |
| - | if (this.ie || this.firefox)
| + | |
| - | this.dropmenuobj.style.left=this.dropmenuobj.style.top="-500px"
| + | |
| - | if (e.type=="click" && obj.visibility==hidden || e.type=="mouseover"){
| + | |
| - | if (obj2.parentNode.className.indexOf("default")==-1) //if tab isn't a default selected one
| + | |
| - | obj2.parentNode.className="selected"
| + | |
| - | obj.visibility="visible"
| + | |
| - | }
| + | |
| - | else if (e.type=="click")
| + | |
| - | obj.visibility="hidden"
| + | |
| - | },
| + | |
| - | | + | |
| - | iecompattest:function(){
| + | |
| - | return (document.compatMode && document.compatMode!="BackCompat")? document.documentElement : document.body
| + | |
| - | },
| + | |
| - | | + | |
| - | clearbrowseredge:function(obj, whichedge){
| + | |
| - | var edgeoffset=0
| + | |
| - | if (whichedge=="rightedge"){
| + | |
| - | var windowedge=this.ie && !window.opera? this.standardbody.scrollLeft+this.standardbody.clientWidth-15 : window.pageXOffset+window.innerWidth-15
| + | |
| - | this.dropmenuobj.contentmeasure=this.dropmenuobj.offsetWidth
| + | |
| - | if (windowedge-this.dropmenuobj.x < this.dropmenuobj.contentmeasure) //move menu to the left?
| + | |
| - | edgeoffset=this.dropmenuobj.contentmeasure-obj.offsetWidth
| + | |
| - | }
| + | |
| - | else{
| + | |
| - | var topedge=this.ie && !window.opera? this.standardbody.scrollTop : window.pageYOffset
| + | |
| - | var windowedge=this.ie && !window.opera? this.standardbody.scrollTop+this.standardbody.clientHeight-15 : window.pageYOffset+window.innerHeight-18
| + | |
| - | this.dropmenuobj.contentmeasure=this.dropmenuobj.offsetHeight
| + | |
| - | if (windowedge-this.dropmenuobj.y < this.dropmenuobj.contentmeasure){ //move up?
| + | |
| - | edgeoffset=this.dropmenuobj.contentmeasure+obj.offsetHeight
| + | |
| - | if ((this.dropmenuobj.y-topedge)<this.dropmenuobj.contentmeasure) //up no good either?
| + | |
| - | edgeoffset=this.dropmenuobj.y+obj.offsetHeight-topedge
| + | |
| - | }
| + | |
| - | this.dropmenuobj.firstlink.style.borderTopWidth=(edgeoffset==0)? 0 : "1px" //Add 1px top border to menu if dropping up
| + | |
| - | }
| + | |
| - | return edgeoffset
| + | |
| - | },
| + | |
| - | | + | |
| - | dropit:function(obj, e, dropmenuID){
| + | |
| - | if (this.dropmenuobj!=null){ //hide previous menu
| + | |
| - | this.dropmenuobj.style.visibility="hidden" //hide menu
| + | |
| - | if (this.previousmenuitem!=null && this.previousmenuitem!=obj){
| + | |
| - | if (this.previousmenuitem.parentNode.className.indexOf("default")==-1) //If the tab isn't a default selected one
| + | |
| - | this.previousmenuitem.parentNode.className=""
| + | |
| - | }
| + | |
| - | }
| + | |
| - | this.clearhidemenu()
| + | |
| - | if (this.ie||this.firefox){
| + | |
| - | obj.onmouseout=function(){tabdropdown.delayhidemenu(obj)}
| + | |
| - | obj.onclick=function(){return !tabdropdown.disablemenuclick} //disable main menu item link onclick?
| + | |
| - | this.dropmenuobj=document.getElementById(dropmenuID)
| + | |
| - | this.dropmenuobj.onmouseover=function(){tabdropdown.clearhidemenu()}
| + | |
| - | this.dropmenuobj.onmouseout=function(e){tabdropdown.dynamichide(e, obj)}
| + | |
| - | this.dropmenuobj.onclick=function(){tabdropdown.delayhidemenu(obj)}
| + | |
| - | this.showhide(this.dropmenuobj.style, e, obj)
| + | |
| - | this.dropmenuobj.x=this.getposOffset(obj, "left")
| + | |
| - | this.dropmenuobj.y=this.getposOffset(obj, "top")
| + | |
| - | this.dropmenuobj.style.left=this.dropmenuobj.x-this.clearbrowseredge(obj, "rightedge")+"px"
| + | |
| - | this.dropmenuobj.style.top=this.dropmenuobj.y-this.clearbrowseredge(obj, "bottomedge")+obj.offsetHeight+1+"px"
| + | |
| - | this.previousmenuitem=obj //remember main menu item mouse moved out from (and into current menu item)
| + | |
| - | this.positionshim() //call iframe shim function
| + | |
| - | }
| + | |
| - | },
| + | |
| - | | + | |
| - | contains_firefox:function(a, b) {
| + | |
| - | while (b.parentNode)
| + | |
| - | if ((b = b.parentNode) == a)
| + | |
| - | return true;
| + | |
| - | return false;
| + | |
| - | },
| + | |
| - | | + | |
| - | dynamichide:function(e, obj2){ //obj2 refers to tab menu item mouse is currently over
| + | |
| - | var evtobj=window.event? window.event : e
| + | |
| - | if (this.ie&&!this.dropmenuobj.contains(evtobj.toElement))
| + | |
| - | this.delayhidemenu(obj2)
| + | |
| - | else if (this.firefox&&e.currentTarget!= evtobj.relatedTarget&& !this.contains_firefox(evtobj.currentTarget, evtobj.relatedTarget))
| + | |
| - | this.delayhidemenu(obj2)
| + | |
| - | },
| + | |
| - | | + | |
| - | delayhidemenu:function(obj2){
| + | |
| - | this.delayhide=setTimeout(function(){tabdropdown.dropmenuobj.style.visibility='hidden'; if (obj2.parentNode.className.indexOf('default')==-1) obj2.parentNode.className=''},this.disappeardelay) //hide menu
| + | |
| - | },
| + | |
| - | | + | |
| - | clearhidemenu:function(){
| + | |
| - | if (this.delayhide!="undefined")
| + | |
| - | clearTimeout(this.delayhide)
| + | |
| - | },
| + | |
| - | | + | |
| - | positionshim:function(){ //display iframe shim function
| + | |
| - | if (this.enableiframeshim && typeof this.shimobject!="undefined"){
| + | |
| - | if (this.dropmenuobj.style.visibility=="visible"){
| + | |
| - | this.shimobject.style.width=this.dropmenuobj.offsetWidth+"px"
| + | |
| - | this.shimobject.style.height=this.dropmenuobj.offsetHeight+"px"
| + | |
| - | this.shimobject.style.left=this.dropmenuobj.style.left
| + | |
| - | this.shimobject.style.top=this.dropmenuobj.style.top
| + | |
| - | }
| + | |
| - | this.shimobject.style.display=(this.dropmenuobj.style.visibility=="visible")? "block" : "none"
| + | |
| - | }
| + | |
| - | },
| + | |
| - | | + | |
| - | hideshim:function(){
| + | |
| - | if (this.enableiframeshim && typeof this.shimobject!="undefined")
| + | |
| - | this.shimobject.style.display='none'
| + | |
| - | },
| + | |
| - | | + | |
| - | isSelected:function(menuurl){
| + | |
| - | var menuurl=menuurl.replace("http://"+menuurl.hostname, "").replace(/^\//, "")
| + | |
| - | return (tabdropdown.currentpageurl==menuurl)
| + | |
| - | },
| + | |
| - | | + | |
| - | init:function(menuid, dselected){
| + | |
| - | this.standardbody=(document.compatMode=="CSS1Compat")? document.documentElement : document.body //create reference to common "body" across doctypes
| + | |
| - | var menuitems=document.getElementById(menuid).getElementsByTagName("a")
| + | |
| - | for (var i=0; i<menuitems.length; i++){
| + | |
| - | if (menuitems[i].getAttribute("rel")){
| + | |
| - | var relvalue=menuitems[i].getAttribute("rel")
| + | |
| - | document.getElementById(relvalue).firstlink=document.getElementById(relvalue).getElementsByTagName("a")[0]
| + | |
| - | menuitems[i].onmouseover=function(e){
| + | |
| - | var event=typeof e!="undefined"? e : window.event
| + | |
| - | tabdropdown.dropit(this, event, this.getAttribute("rel"))
| + | |
| - | }
| + | |
| - | }
| + | |
| - | if (dselected=="auto" && typeof setalready=="undefined" && this.isSelected(menuitems[i].href)){
| + | |
| - | menuitems[i].parentNode.className+=" selected default"
| + | |
| - | var setalready=true
| + | |
| - | }
| + | |
| - | else if (parseInt(dselected)==i)
| + | |
| - | menuitems[i].parentNode.className+=" selected default"
| + | |
| - | }
| + | |
| - | }
| + | |
| - | | + | |
| - | }
| + | |
| - | </script>
| + | |
| - | <style>
| + | |
| - | .ddcolortabs{
| + | |
| - | padding: 0;
| + | |
| - | width: 100%;
| + | |
| - | background: transparent;
| + | |
| - | voice-family: "\"}\"";
| + | |
| - | voice-family: inherit;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs ul{
| + | |
| - | font: normal 11px Arial, Verdana, sans-serif;
| + | |
| - | margin:0;
| + | |
| - | padding:0;
| + | |
| - | list-style:none;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs li{
| + | |
| - | display:inline;
| + | |
| - | margin:0 2px 0 0;
| + | |
| - | padding:0;
| + | |
| - | text-transform:uppercase;
| + | |
| - | }
| + | |
| - | | + | |
| - | | + | |
| - | .ddcolortabs a{
| + | |
| - | float:left;
| + | |
| - | color: white;
| + | |
| - | background: black url(media/color_tabs_left.gif) no-repeat left top;
| + | |
| - | margin:0 2px 0 0;
| + | |
| - | padding:0 0 1px 3px;
| + | |
| - | text-decoration:none;
| + | |
| - | letter-spacing: 1px;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a span{
| + | |
| - | float:left;
| + | |
| - | display:block;
| + | |
| - | background: transparent url(media/color_tabs_right.gif) no-repeat right top;
| + | |
| - | padding: 4px 8px 2px 7px;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a span{
| + | |
| - | float:none;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a:hover{
| + | |
| - | background-color: #591f20;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a:hover span{
| + | |
| - | background-color: #591f20;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs .selected a, #ddcolortabs .selected a span{ /*currently selected tab*/
| + | |
| - | background-color: #591f20;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabsline{
| + | |
| - | clear: both;
| + | |
| - | padding: 0;
| + | |
| - | width: 100%;
| + | |
| - | height: 8px;
| + | |
| - | line-height: 8px;
| + | |
| - | background: black;
| + | |
| - | border-top: 1px solid #fff; /*Remove this to remove border between bar and tabs*/
| + | |
| - | }
| + | |
| - | | + | |
| - | /* ######### Style for Drop Down Menu ######### */
| + | |
| - | | + | |
| - | .dropmenudiv_a{
| + | |
| - | position:absolute;
| + | |
| - | top: 0;
| + | |
| - | border: 1px solid black; /*THEME CHANGE HERE*/
| + | |
| - | border-top-width: 8px; /*Top border width. Should match height of .ddcolortabsline above*/
| + | |
| - | border-bottom-width: 0;
| + | |
| - | font:normal 12px Arial;
| + | |
| - | line-height:18px;
| + | |
| - | z-index:100;
| + | |
| - | background-color: white;
| + | |
| - | width: 200px;
| + | |
| - | visibility: hidden;
| + | |
| - | }
| + | |
| - | | + | |
| - | | + | |
| - | .dropmenudiv_a a{
| + | |
| - | width: auto;
| + | |
| - | display: block;
| + | |
| - | text-indent: 5px;
| + | |
| - | border-top: 0 solid #678b3f;
| + | |
| - | border-bottom: 1px solid #678b3f; /*THEME CHANGE HERE*/
| + | |
| - | padding: 2px 0;
| + | |
| - | text-decoration: none;
| + | |
| - | color: black;
| + | |
| - | }
| + | |
| - | | + | |
| - | * html .dropmenudiv_a a{ /*IE only hack*/
| + | |
| - | width: 100%;
| + | |
| - | }
| + | |
| - | | + | |
| - | .dropmenudiv_a a:hover{ /*THEME CHANGE HERE*/
| + | |
| - | background-color: #8a3c3d;
| + | |
| - | color: white;
| + | |
| - | }
| + | |
| - | </style>
| + | |
| - | </head>
| + | |
| - | | + | |
| - | <!-- CSS for Drop Down Tabs Menu #1 -->
| + | |
| - | <link rel="stylesheet" type="text/css" href="ddcolortabs.css" />
| + | |
| - | | + | |
| - | <div id="colortab" class="ddcolortabs">
| + | |
| - | <ul>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh" title="Home"><span>Home</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Project" title="Project" rel="dropmenu1_a"><span>The Project</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Team" title="Team" ><span>The Team</span></a></li>
| + | |
| - | <li><a href="http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2008&group=Edinburgh" title="Project" rel="dropmenu1_a"><span>BioBrick Parts</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Modeling" title="Modelling" rel="dropmenu2_a"><span>Modelling</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Notebook" title="Notebook"><span>Notebook</span></a></li>
| + | |
| - | </ul>
| + | |
| - | </div>
| + | |
| - | <div class="ddcolortabsline"> </div>
| + | |
| - | <div id="dropmenu1_a" class="dropmenudiv_a">
| + | |
| - | <a href="https://2008.igem.org/Team:Edinburgh/Team">Overview</a>
| + | |
| - | <a href="https://2008.igem.org/Team:Edinburgh/Team">Step1</a>
| + | |
| - | <a href="https://2008.igem.org/Team:Edinburgh/Team">Step2</a>
| + | |
| - | </div>
| + | |
| - | <script type="text/javascript">
| + | |
| - | //SYNTAX: tabdropdown.init("menu_id", [integer OR "auto"])
| + | |
| - | tabdropdown.init("colortab", 3)
| + | |
| - | </script>
| + | |
| - | </html>
| + | |
| - | | + | |
| - | === Week 8 ===
| + | |
| - | <title>Edinburgh iGem 2008</title>
| + | |
| - | <script type="text/javascript">
| + | |
| - | //Drop Down Tabs Menu- Author: Dynamic Drive (http://www.dynamicdrive.com)
| + | |
| - | //Created: May 16th, 07'
| + | |
| - | | + | |
| - | var tabdropdown={
| + | |
| - | * disappeardelay: 200, //set delay in miliseconds before menu disappears onmouseout
| + | |
| - | disablemenuclick: false, //when user clicks on a menu item with a drop down menu, disable menu item's link?
| + | |
| - | enableiframeshim: 1, //1 or 0, for true or false
| + | |
| - | | + | |
| - | //No need to edit beyond here////////////////////////
| + | |
| - | dropmenuobj: null, ie: document.all, firefox: document.getElementById&&!document.all, previousmenuitem:null,
| + | |
| - | currentpageurl: window.location.href.replace("http://"+window.location.hostname, "").replace(/^\//, ""), //get current page url (minus hostname, ie: http://www.dynamicdrive.com/)
| + | |
| - | | + | |
| - | getposOffset:function(what, offsettype){
| + | |
| - | var totaloffset=(offsettype=="left")? what.offsetLeft : what.offsetTop;
| + | |
| - | var parentEl=what.offsetParent;
| + | |
| - | while (parentEl!=null){
| + | |
| - | totaloffset=(offsettype=="left")? totaloffset+parentEl.offsetLeft : totaloffset+parentEl.offsetTop;
| + | |
| - | parentEl=parentEl.offsetParent;
| + | |
| - | }
| + | |
| - | return totaloffset;
| + | |
| - | },
| + | |
| - | | + | |
| - | showhide:function(obj, e, obj2){ //obj refers to drop down menu, obj2 refers to tab menu item mouse is currently over
| + | |
| - | if (this.ie || this.firefox)
| + | |
| - | this.dropmenuobj.style.left=this.dropmenuobj.style.top="-500px"
| + | |
| - | if (e.type=="click" && obj.visibility==hidden || e.type=="mouseover"){
| + | |
| - | if (obj2.parentNode.className.indexOf("default")==-1) //if tab isn't a default selected one
| + | |
| - | obj2.parentNode.className="selected"
| + | |
| - | obj.visibility="visible"
| + | |
| - | }
| + | |
| - | else if (e.type=="click")
| + | |
| - | obj.visibility="hidden"
| + | |
| - | },
| + | |
| - | | + | |
| - | iecompattest:function(){
| + | |
| - | return (document.compatMode && document.compatMode!="BackCompat")? document.documentElement : document.body
| + | |
| - | },
| + | |
| - | | + | |
| - | clearbrowseredge:function(obj, whichedge){
| + | |
| - | var edgeoffset=0
| + | |
| - | if (whichedge=="rightedge"){
| + | |
| - | var windowedge=this.ie && !window.opera? this.standardbody.scrollLeft+this.standardbody.clientWidth-15 : window.pageXOffset+window.innerWidth-15
| + | |
| - | this.dropmenuobj.contentmeasure=this.dropmenuobj.offsetWidth
| + | |
| - | if (windowedge-this.dropmenuobj.x < this.dropmenuobj.contentmeasure) //move menu to the left?
| + | |
| - | edgeoffset=this.dropmenuobj.contentmeasure-obj.offsetWidth
| + | |
| - | }
| + | |
| - | else{
| + | |
| - | var topedge=this.ie && !window.opera? this.standardbody.scrollTop : window.pageYOffset
| + | |
| - | var windowedge=this.ie && !window.opera? this.standardbody.scrollTop+this.standardbody.clientHeight-15 : window.pageYOffset+window.innerHeight-18
| + | |
| - | this.dropmenuobj.contentmeasure=this.dropmenuobj.offsetHeight
| + | |
| - | if (windowedge-this.dropmenuobj.y < this.dropmenuobj.contentmeasure){ //move up?
| + | |
| - | edgeoffset=this.dropmenuobj.contentmeasure+obj.offsetHeight
| + | |
| - | if ((this.dropmenuobj.y-topedge)<this.dropmenuobj.contentmeasure) //up no good either?
| + | |
| - | edgeoffset=this.dropmenuobj.y+obj.offsetHeight-topedge
| + | |
| - | }
| + | |
| - | this.dropmenuobj.firstlink.style.borderTopWidth=(edgeoffset==0)? 0 : "1px" //Add 1px top border to menu if dropping up
| + | |
| - | }
| + | |
| - | return edgeoffset
| + | |
| - | },
| + | |
| - | | + | |
| - | dropit:function(obj, e, dropmenuID){
| + | |
| - | if (this.dropmenuobj!=null){ //hide previous menu
| + | |
| - | this.dropmenuobj.style.visibility="hidden" //hide menu
| + | |
| - | if (this.previousmenuitem!=null && this.previousmenuitem!=obj){
| + | |
| - | if (this.previousmenuitem.parentNode.className.indexOf("default")==-1) //If the tab isn't a default selected one
| + | |
| - | this.previousmenuitem.parentNode.className=""
| + | |
| - | }
| + | |
| - | }
| + | |
| - | this.clearhidemenu()
| + | |
| - | if (this.ie||this.firefox){
| + | |
| - | obj.onmouseout=function(){tabdropdown.delayhidemenu(obj)}
| + | |
| - | obj.onclick=function(){return !tabdropdown.disablemenuclick} //disable main menu item link onclick?
| + | |
| - | this.dropmenuobj=document.getElementById(dropmenuID)
| + | |
| - | this.dropmenuobj.onmouseover=function(){tabdropdown.clearhidemenu()}
| + | |
| - | this.dropmenuobj.onmouseout=function(e){tabdropdown.dynamichide(e, obj)}
| + | |
| - | this.dropmenuobj.onclick=function(){tabdropdown.delayhidemenu(obj)}
| + | |
| - | this.showhide(this.dropmenuobj.style, e, obj)
| + | |
| - | this.dropmenuobj.x=this.getposOffset(obj, "left")
| + | |
| - | this.dropmenuobj.y=this.getposOffset(obj, "top")
| + | |
| - | this.dropmenuobj.style.left=this.dropmenuobj.x-this.clearbrowseredge(obj, "rightedge")+"px"
| + | |
| - | this.dropmenuobj.style.top=this.dropmenuobj.y-this.clearbrowseredge(obj, "bottomedge")+obj.offsetHeight+1+"px"
| + | |
| - | this.previousmenuitem=obj //remember main menu item mouse moved out from (and into current menu item)
| + | |
| - | this.positionshim() //call iframe shim function
| + | |
| - | }
| + | |
| - | },
| + | |
| - | | + | |
| - | contains_firefox:function(a, b) {
| + | |
| - | while (b.parentNode)
| + | |
| - | if ((b = b.parentNode) == a)
| + | |
| - | return true;
| + | |
| - | return false;
| + | |
| - | },
| + | |
| - | | + | |
| - | dynamichide:function(e, obj2){ //obj2 refers to tab menu item mouse is currently over
| + | |
| - | var evtobj=window.event? window.event : e
| + | |
| - | if (this.ie&&!this.dropmenuobj.contains(evtobj.toElement))
| + | |
| - | this.delayhidemenu(obj2)
| + | |
| - | else if (this.firefox&&e.currentTarget!= evtobj.relatedTarget&& !this.contains_firefox(evtobj.currentTarget, evtobj.relatedTarget))
| + | |
| - | this.delayhidemenu(obj2)
| + | |
| - | },
| + | |
| - | | + | |
| - | delayhidemenu:function(obj2){
| + | |
| - | this.delayhide=setTimeout(function(){tabdropdown.dropmenuobj.style.visibility='hidden'; if (obj2.parentNode.className.indexOf('default')==-1) obj2.parentNode.className=''},this.disappeardelay) //hide menu
| + | |
| - | },
| + | |
| - | | + | |
| - | clearhidemenu:function(){
| + | |
| - | if (this.delayhide!="undefined")
| + | |
| - | clearTimeout(this.delayhide)
| + | |
| - | },
| + | |
| - | | + | |
| - | positionshim:function(){ //display iframe shim function
| + | |
| - | if (this.enableiframeshim && typeof this.shimobject!="undefined"){
| + | |
| - | if (this.dropmenuobj.style.visibility=="visible"){
| + | |
| - | this.shimobject.style.width=this.dropmenuobj.offsetWidth+"px"
| + | |
| - | this.shimobject.style.height=this.dropmenuobj.offsetHeight+"px"
| + | |
| - | this.shimobject.style.left=this.dropmenuobj.style.left
| + | |
| - | this.shimobject.style.top=this.dropmenuobj.style.top
| + | |
| - | }
| + | |
| - | this.shimobject.style.display=(this.dropmenuobj.style.visibility=="visible")? "block" : "none"
| + | |
| - | }
| + | |
| - | },
| + | |
| - | | + | |
| - | hideshim:function(){
| + | |
| - | if (this.enableiframeshim && typeof this.shimobject!="undefined")
| + | |
| - | this.shimobject.style.display='none'
| + | |
| - | },
| + | |
| - | | + | |
| - | isSelected:function(menuurl){
| + | |
| - | var menuurl=menuurl.replace("http://"+menuurl.hostname, "").replace(/^\//, "")
| + | |
| - | return (tabdropdown.currentpageurl==menuurl)
| + | |
| - | },
| + | |
| - | | + | |
| - | init:function(menuid, dselected){
| + | |
| - | this.standardbody=(document.compatMode=="CSS1Compat")? document.documentElement : document.body //create reference to common "body" across doctypes
| + | |
| - | var menuitems=document.getElementById(menuid).getElementsByTagName("a")
| + | |
| - | for (var i=0; i<menuitems.length; i++){
| + | |
| - | if (menuitems[i].getAttribute("rel")){
| + | |
| - | var relvalue=menuitems[i].getAttribute("rel")
| + | |
| - | document.getElementById(relvalue).firstlink=document.getElementById(relvalue).getElementsByTagName("a")[0]
| + | |
| - | menuitems[i].onmouseover=function(e){
| + | |
| - | var event=typeof e!="undefined"? e : window.event
| + | |
| - | tabdropdown.dropit(this, event, this.getAttribute("rel"))
| + | |
| - | }
| + | |
| - | }
| + | |
| - | if (dselected=="auto" && typeof setalready=="undefined" && this.isSelected(menuitems[i].href)){
| + | |
| - | menuitems[i].parentNode.className+=" selected default"
| + | |
| - | var setalready=true
| + | |
| - | }
| + | |
| - | else if (parseInt(dselected)==i)
| + | |
| - | menuitems[i].parentNode.className+=" selected default"
| + | |
| - | }
| + | |
| - | }
| + | |
| - | | + | |
| - | }
| + | |
| - | </script>
| + | |
| - | <style>
| + | |
| - | .ddcolortabs{
| + | |
| - | padding: 0;
| + | |
| - | width: 100%;
| + | |
| - | background: transparent;
| + | |
| - | voice-family: "\"}\"";
| + | |
| - | voice-family: inherit;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs ul{
| + | |
| - | font: normal 11px Arial, Verdana, sans-serif;
| + | |
| - | margin:0;
| + | |
| - | padding:0;
| + | |
| - | list-style:none;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs li{
| + | |
| - | display:inline;
| + | |
| - | margin:0 2px 0 0;
| + | |
| - | padding:0;
| + | |
| - | text-transform:uppercase;
| + | |
| - | }
| + | |
| - | | + | |
| - | | + | |
| - | .ddcolortabs a{
| + | |
| - | float:left;
| + | |
| - | color: white;
| + | |
| - | background: black url(media/color_tabs_left.gif) no-repeat left top;
| + | |
| - | margin:0 2px 0 0;
| + | |
| - | padding:0 0 1px 3px;
| + | |
| - | text-decoration:none;
| + | |
| - | letter-spacing: 1px;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a span{
| + | |
| - | float:left;
| + | |
| - | display:block;
| + | |
| - | background: transparent url(media/color_tabs_right.gif) no-repeat right top;
| + | |
| - | padding: 4px 8px 2px 7px;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a span{
| + | |
| - | float:none;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a:hover{
| + | |
| - | background-color: #591f20;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs a:hover span{
| + | |
| - | background-color: #591f20;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabs .selected a, #ddcolortabs .selected a span{ /*currently selected tab*/
| + | |
| - | background-color: #591f20;
| + | |
| - | }
| + | |
| - | | + | |
| - | .ddcolortabsline{
| + | |
| - | clear: both;
| + | |
| - | padding: 0;
| + | |
| - | width: 100%;
| + | |
| - | height: 8px;
| + | |
| - | line-height: 8px;
| + | |
| - | background: black;
| + | |
| - | border-top: 1px solid #fff; /*Remove this to remove border between bar and tabs*/
| + | |
| - | }
| + | |
| - | | + | |
| - | /* ######### Style for Drop Down Menu ######### */
| + | |
| - | | + | |
| - | .dropmenudiv_a{
| + | |
| - | position:absolute;
| + | |
| - | top: 0;
| + | |
| - | border: 1px solid black; /*THEME CHANGE HERE*/
| + | |
| - | border-top-width: 8px; /*Top border width. Should match height of .ddcolortabsline above*/
| + | |
| - | border-bottom-width: 0;
| + | |
| - | font:normal 12px Arial;
| + | |
| - | line-height:18px;
| + | |
| - | z-index:100;
| + | |
| - | background-color: white;
| + | |
| - | width: 200px;
| + | |
| - | visibility: hidden;
| + | |
| - | }
| + | |
| - | | + | |
| - | | + | |
| - | .dropmenudiv_a a{
| + | |
| - | width: auto;
| + | |
| - | display: block;
| + | |
| - | text-indent: 5px;
| + | |
| - | border-top: 0 solid #678b3f;
| + | |
| - | border-bottom: 1px solid #678b3f; /*THEME CHANGE HERE*/
| + | |
| - | padding: 2px 0;
| + | |
| - | text-decoration: none;
| + | |
| - | color: black;
| + | |
| - | }
| + | |
| - | | + | |
| - | * html .dropmenudiv_a a{ /*IE only hack*/
| + | |
| - | width: 100%;
| + | |
| - | }
| + | |
| - | | + | |
| - | .dropmenudiv_a a:hover{ /*THEME CHANGE HERE*/
| + | |
| - | background-color: #8a3c3d;
| + | |
| - | color: white;
| + | |
| - | }
| + | |
| - | </style>
| + | |
| - | </head>
| + | |
| - | | + | |
| - | <!-- CSS for Drop Down Tabs Menu #1 -->
| + | |
| - | <link rel="stylesheet" type="text/css" href="ddcolortabs.css" />
| + | |
| - | | + | |
| - | <div id="colortab" class="ddcolortabs">
| + | |
| - | <ul>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh" title="Home"><span>Home</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Project" title="Project" rel="dropmenu1_a"><span>The Project</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Team" title="Team" ><span>The Team</span></a></li>
| + | |
| - | <li><a href="http://partsregistry.org/cgi/partsdb/pgroup.cgi?pgroup=iGEM2008&group=Edinburgh" title="Project" rel="dropmenu1_a"><span>BioBrick Parts</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Modeling" title="Modelling" rel="dropmenu2_a"><span>Modelling</span></a></li>
| + | |
| - | <li><a href="https://2008.igem.org/Team:Edinburgh/Notebook" title="Notebook"><span>Notebook</span></a></li>
| + | |
| - | </ul>
| + | |
| - | </div>
| + | |
| - | <div class="ddcolortabsline"> </div>
| + | |
| - | <div id="dropmenu1_a" class="dropmenudiv_a">
| + | |
| - | <a href="https://2008.igem.org/Team:Edinburgh/Team">Overview</a>
| + | |
| - | <a href="https://2008.igem.org/Team:Edinburgh/Team">Step1</a>
| + | |
| - | <a href="https://2008.igem.org/Team:Edinburgh/Team">Step2</a>
| + | |
| - | </div>
| + | |
| - | <script type="text/javascript">
| + | |
| - | //SYNTAX: tabdropdown.init("menu_id", [integer OR "auto"])
| + | |
| - | tabdropdown.init("colortab", 3)
| + | |
| - | </script>
| + | |
| - | </html>
| + | |
| - | | + | |
| - | For more information, please see [https://www.wiki.ed.ac.uk/display/iGEM2008/HOME our internal wiki].
| + | |
| - | | + | |
| - | = Calender =
| + | |
| - | | + | |
| - | <table>
| + | |
| - | <html>
| + | |
| - | <style type="text/css">
| + | |
| - | table.calendar { margin: 0; padding: 2px; }
| + | |
| - | table.calendar td { margin: 0; padding: 1px; vertical-align: top; }
| + | |
| - | table.month .heading td { padding:1px; background-color: black; color: white; text-align:center; font-size:140%; font-weight:bold; }
| + | |
| - | table.month .dow td { color:#000000; text-align:center; font-size:100%; }
| + | |
| - | table.month td.today { background-color:#cd0000; }
| + | |
| - | table.month td {
| + | |
| - | border: none;
| + | |
| - | margin: 0;
| + | |
| - | padding: 0pt 0.5pt;
| + | |
| - | font-weight: bold;
| + | |
| - | font-size: 9pt;
| + | |
| - | text-align: right;
| + | |
| - | background-color: white;
| + | |
| - | }
| + | |
| - | #bodyContent table.month a { background:none; padding:0 }
| + | |
| - | .day-active { color:#cd0000 }
| + | |
| - | .day-empty { color:#000000 }
| + | |
| - | | + | |
| - | </style>
| + | |
| - | </html>
| + | |
| - | | + | |
| - | | + | |
| - | {|style="font color="#ffffff"; "background-color:"#cd0000"; cellpadding="0" cellspacing="4" border="4" bordercolor="#000"; border-spacing:0px; text-align:center" width="250px"
| + | |
| - | <h3>Calendar</h3>
| + | |
| - | |-
| + | |
| - | |
| + | |
| - | <td><td> {{#calendar: title=Edinburgh |year=2008 | month=06}}
| + | |
| - | <td><td> {{#calendar: title=Edinburgh |year=2008 | month=07}}
| + | |
| - | <td><td> {{#calendar: title=Edinburgh |year=2008 | month=08}}
| + | |
| - | </td></tr>
| + | |
| - | |-
| + | |
| - | |
| + | |
| - | </table>
| + | |
| - | | + | |
| - | | + | |
| - | | + | |
| - | = Lab Notebook =
| + | |
| - | === Week 8 ===
| + | |
| - | ==== Friday 8 August 08 ====
| + | |
| - | | + | |
| - | * Plate 94 (BABEL2+''glgC''-mut1,2,3) has white cultures, so can be prepped for minipreps. Plate 95 (pSB1A2+''glgC''-mut1,2) has blue cultures. Therefore transformation of L31 (''glgC''-mut1,2 to Edinbrick1) has been repeated on '''plates 100 and 101'''. (HX)
| + | |
| - | * Transformation of L32 (pSB1A2+''crtB''+''crtI'') on '''plates 98 and 99'''. (HX)
| + | |
| - | * Digested pCstA (P54) and Edinbrick1 using Spe1/EcoR1. Ligated as '''L33''' to be transformed tomorrow (OG)
| + | |
| - | * ''Arabidopsis'' ''isa1'' and ''isa2'' cDNAs have arrived as well as ''Zea mays'' ''su1'', ''iso2'' and ''iso3''. The ''Arabidopsis'' genes are full of forbidden restriction sites, so it would be best to use the maize genes. Primers will need to be designed. (AH)
| + | |
| - | * PCRed ''cenA'' and ''cex'' with a) KOD polymerase, b) Velocity polymerase separately to make '''P55''' (''cenA'' by KOD), '''P56''' (''cenA'' by Velocity), '''P57''' (''cex'' by KOD) and '''P58''' (''cex'' by Velocity). (Yan)
| + | |
| - | * Combined rbs+''dxs'' with rbs+''crtE'' as '''L34''', and rbs+''dxs'' with rbs+''lims1'' as '''L35'''. L34 and L35 ligation is being allowed to occur at 16°C overnight. (Yan)
| + | |
| - | * M79 sequencing results indicate that M79 is BABEL2+''crtE''. (AH)
| + | |
"
