Team:KULeuven/Road Map

From 2008.igem.org

(Difference between revisions)
(→Meetings in June)
(Replacing page with '{{:Team:KULeuven/Tools/Styling}} {{:Team:KULeuven/Tools/Scripting}} {{:Team:KULeuven/Tools/Header}}')
 
(69 intermediate revisions not shown)
Line 1: Line 1:
-
{|style="font color="#000000"; background-color:#ffffff; border-spacing:6px; text-align:center" width="960px"
+
{{:Team:KULeuven/Tools/Styling}}
-
!style="text-align:center; background-color:#003E81; border-width:0px; padding:3px;"|[[Team:KULeuven|<font color="#ffffff">Home</font>]]
+
{{:Team:KULeuven/Tools/Scripting}}
-
!style="text-align:center; background-color:#003E81; border-width:0px; padding:3px;"|[[Team:KULeuven/Team|<font color="#ffffff">The Team</font>]]
+
{{:Team:KULeuven/Tools/Header}}
-
!style="text-align:center; background-color:#003E81; border-width:0px; padding:3px;"|[[Team:KULeuven/Road Map|<font color="#ffffff">Road Map</font>]]
+
-
!style="text-align:center; background-color:#003E81; border-width:0px; padding:3px;"|[[Team:KULeuven/Project|<font color="#ffffff">The Project</font>]]
+
-
!style="text-align:center; background-color:#003E81; border-width:0px; padding:3px;"|[[Team:KULeuven/Parts|<font color="#ffffff">Parts Submitted to the Registry</font>]]
+
-
!style="text-align:center; background-color:#003E81; border-width:0px; padding:3px;"|[[Team:KULeuven/Modeling|<font color="#ffffff">Modeling</font>]]
+
-
!style="text-align:center; background-color:#003E81; border-width:0px; padding:3px;"|[[Team:KULeuven/Notebook|<font color="#ffffff">Notebook</font>]]
+
-
|}
+
-
[[Image:kulbanner.jpg|960px]]
+
-
 
+
-
 
+
-
This page contains information on meetings and schedules, on practical stuff, and some suggestions on background reading.<br><br>Brainstorm ideas for the project have been moved to the [[Team:KULeuven/Project|project page]].
+
-
<br><br> Spelen met de wiki doe je in de [[Team:KULeuven/Zandbak|zandbak]], vragen stellen of suggesties doen op de [[Team:KULeuven/Discussion|discussiepagina]].
+
-
 
+
-
 
+
-
= Meetings =
+
-
 
+
-
== 1st Brainstorm ==
+
-
 
+
-
students and instructors brainstorm: Thursday May 22nd 10am @ ESAT 01.57
+
-
<br>
+
-
 
+
-
present: all students, SDK, LVA, YM, JR, GG, IT
+
-
 
+
-
* Each student [[Team:KULeuven/Project|presented]] his/her 3 favourite projects of previous iGEMs. All project brainstorm ideas are moved to the [[Team:KULeuven/Project|project page]]. There, you can add links to your favourite projects and/or upload your presentation.
+
-
* The group picture is on our [[Team:KULeuven/Team|team page]].
+
-
* Vote [[Team:KULeuven/Discussion|here]] for the logo you like best (thanks Jonas for the logo and Benjamien for the Zandbak and Discussiepagina idea!).
+
-
* To make a summer schedule, '''please indicate your holiday plans below''' (Practical stuff - Planned summer holidays). The last exam is on June 27th.
+
-
* Since the engineers want to see what's going on in the lab, and the biologists/bio-engineers want to learn about modeling, we'll organize some introductory tutorials in the beginning of the summer holidays.
+
-
* Put ideas and suggestions for the wiki [[Team:KULeuven/Discussion|here]].
+
-
* Inge will inform whether the students can stay at the Studentenwijk Arenberg during the summer holidays.
+
-
* You are all welcome to join the [http://www.kuleuven.be/bioscenter/ BioSCENTer launch event] (Wednesday 28th, Max Weber auditorium, Parkstraat 51). Our iGEM participation will be presented between 15.35 and 15.45.
+
-
* Check out the [http://www.kuleuven.be/bioscenter/igem iGEM website] at [http://www.kuleuven.be/bioscenter BioSCENTer].
+
-
<br>
+
-
* Good luck with the exams!
+
-
 
+
-
 
+
-
 
+
-
== 2nd Brainstorm ==
+
-
 
+
-
We'll have our brainstorm on Tuesday June 10th from 12 to 14 in the meeting room 01.213 of the Landbouwinstituut. The doodle for this meeting was [http://www.doodle.ch/792ach8ydtxfzf9y here].
+
-
<br> attended: SDK, KM, AC, JR, IT, LVO
+
-
<br>are excused: BDM, JW, YM, JVDL, GG
+
-
<br><br>
+
-
Meeting agenda:
+
-
* overview teachers workshop
+
-
* discussion project proposals wiki
+
-
* suggestions for future meetings (goal = final project by the end of june)
+
-
<br>
+
-
Two things to think about when choosing a project (from the Teachers Workshop):
+
-
* divide the project into subparts in such a way that the whole project does not fail if one subpart fails / aim for intermediate goals and aim further if remaining time allows
+
-
* iGEM is about doing synthetic biology based on standard parts, not about freestyle synthetic biology, however great that can be
+
-
<br>
+
-
'''Background reading'''
+
-
* PMID 16978856: Chris Voigt 2006 review on synthetic biology parts (sensors, switches etc.)
+
-
* PMID 18410688: BioBrick vectors
+
-
 
+
-
 
+
-
== Meetings in June ==
+
-
 
+
-
Please indicate your availability [http://www.doodle.ch/d3mfvkme93p6n7th here]. Students are excused of course ;)
+
-
 
+
-
= Practical stuff =
+
-
 
+
-
nickvd: I propose to start working on the project the first week of July (read: Monday 7th). In that way we can get some rest after the exams, recharge our batteries so we can start working with a clear mind and full of motivation!
+
-
 
+
-
*That would be excellent, because I' m going to Werchter... So I'm available starting from Monday 7th --[[User:Hanne|Hanne]] 20:05, 22 May 2008 (UTC)
+
-
* I am also back on the 7th. --[[user:andim|Andim]]
+
-
* ...
+
-
 
+
-
Are there people that can start on Monday 30th of June or somewhere that week? For instance because they have few exams, don't like holidays... ;) For some BioBricks playing-around, preliminary testing, toy-modeling etc. --Inge
+
-
* My last exam is on the 25th... I'll have a headache for the first two days and then I would like to review certain things on PID-controllers and Matlab, so I figure I should be able to start soon. --[[User:Avdmeers|Antoine]]
+
-
* I am can start the 30th, but don't know if I will be able to be there all day. However, from the 31st afternoon, I can start for sure. [[user:Bmoeyaert|Benjamien]]
+
-
* I should be able to start the 1st of July. [[user:BNathalie|Nathalie]]
+
-
* Normally I can also start the 30th of june [[user:Jotaro|Jan]]
+
-
* I don't mind messing about a bit that first week, so no problem for me [[user:Zeunas|Jonas]]
+
-
 
+
-
== Planned summer holidays==
+
-
* IT: August 2nd-17th
+
-
* [[User:Bmoeyaert|Benjamien]]: August 2nd-17th
+
-
* nickvd: no holiday plans, only moving plans the first week of July. I would also prefer to end somewhere around September 10th to get some rest before my thesis year.
+
-
* Stefanie: no holiday plans, only moving plans the first week of July.
+
-
* [[User:Hanne|Hanne]]: August 11th-17th, and two very short mini-breaks, but they aren't planned yet.
+
-
* [[User:Zeunas|Jonas]]: I'm out of town September 15-21 and end of july, no other plans yet
+
-
* Elke: September 12th-19th
+
-
* [[User:Jotaro|Jan]]: In the beginning of september I'm probably expected to start in the lab with my thesis, but maybe I can also work a week for my thesis in august so I can also participate a week in IGEM in september. I'll try to arrange what fits with my promotor, but it's too early to say. I don't have holiday plans yet, but if there's a gap when there's no work for IGEM, I'll probably go on holiday :)
+
-
* [[User:BNathalie|Nathalie]]: I only planned something from June 28th until July 1st. So normally, I will be available all the time.
+
-
* [[User:maarten|maarten]]: no holiday plans so far, but like nick I would also prefer to end somewhere around September 10th so I can relax a bit before I start working on my thesis
+
-
* [[User:Avdmeers|Antoine]]: 3 short breaks in August, not planned yet though
+
-
*[[User:andim|Andim]]: June 24th- July7th I will be at home in Istanbul, then the weekend after I am not here.
+
-
 
+
-
== What not to forget ==
+
-
 
+
-
* international passport
+
-
* team t-shirt (check whether we can use Jan Fabre's Totem)
+
-
<br><br>
+
-
 
+
-
= Interesting reads =
+
-
<!--  biblio werkt nog niet <biblio> -->
+
-
<!-- #paper 1 pmid=10659857 -->
+
-
 
+
-
== Teaching resources ==
+
-
<br>
+
-
* [http://openwetware.org/wiki/Imperial_College/Courses/Spring2008/Synthetic_Biology Imperial College Introduction to Synthetic Biology Spring 2008]
+
-
* [http://openwetware.org/wiki/Imperial_College/Courses/Spring2008/Synthetic_Biology/Computer_Modelling_Practicals Imperial College Computer Modelling Practicals Spring 2008]
+
-
* [http://openwetware.org/wiki/Intertech:iSB2008 Valencia Introduction to Synthetic Biology 2008]
+
-
 
+
-
== Software resources ==
+
-
 
+
-
* [http://en.wikipedia.org/wiki/Wikipedia:Tutorial A wiki tutorial that can be very useful]
+
-
* [http://sbml.org SBML]
+
-
* [http://www.systems-biology.org/cd/index.html CellDesigner]
+
-
 
+
-
== General ==
+
-
<br>
+
-
* [http://www.nature.com/nature/comics/syntheticbiologycomic/index.html synthetic biology comic]
+
-
<br>
+
-
== iGEM and BioBricks ==
+
-
<br>
+
-
* [http://parts.mit.edu/wiki/index.php/Resources introductory resources on the iGEM competition]
+
-
* [http://partsregistry.org/wiki/index.php/Help:Team_experience_tutorial iGEM tutorial]
+
-
* [http://openwetware.org/wiki/IGEM:IMPERIAL/2006/project/Oscillator/Theoretical_Analyses example of an iGEM model - Imperial 2006]
+
-
<br>
+
-
* [http://partsregistry.org/Main_Page Registry of Standard Biological Parts]
+
-
* [http://partsregistry.org/Help:IGEM_08_DNA_distribution BioBricks 2008 spring distribution]
+
-
* [http://partsregistry.org/Measurement BioBricks measurement]
+
-
* [http://openwetware.org/wiki/Parts_characterization parts characterization]
+
-
<br>
+
-
 
+
-
== Original research papers and reviews ==
+
-
<br>
+
-
* PMID 10659857
+
-
* PMID 10659856
+
-
* PMID 15858574
+
-
* PMID 17700541
+
-
* PMID 16330045
+
-
* PMID 18410688
+
-
* PMID 16306983
+
-
 
+
-
<!-- </biblio> -->
+

Latest revision as of 15:42, 19 October 2008

  dock/undock dropdown  

Retrieved from "http://2008.igem.org/Team:KULeuven/Road_Map"