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Team:UNIPV-Pavia/Notebook/Week12
From 2008.igem.org
(Difference between revisions)
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*We had 5 plates to screen with colony PCR: | *We had 5 plates to screen with colony PCR: | ||
| - | **BBa_B0030-BBa_C0051-BBa_B0030-BBa_C0079-'''BBa_B1006'''-BBa_R0051-BBa_B0030-BBa_C0062-BBa_B1006-BBa_R0062-BBa_B0030-BBa_E1010-BBa_B1006 | + | **BBa_B0030-BBa_C0051-BBa_B0030-BBa_C0079-'''BBa_B1006'''-BBa_R0051-BBa_B0030-BBa_C0062-BBa_B1006-BBa_R0062-BBa_B0030-BBa_E1010-BBa_B1006 (that we call "a") |
| - | **BBa_B0030-BBa_C0061-BBa_B1006-'''BBa_R0062'''-BBa_B0030-BBa_E0040-BBa_B1006 | + | **BBa_B0030-BBa_C0061-BBa_B1006-'''BBa_R0062'''-BBa_B0030-BBa_E0040-BBa_B1006 (that we call "b") |
| - | **BBa_B0030-BBa_C0078-BBa_B1006-'''BBa_R0079'''-BBa_B0030-BBa_E0040-BBa_B1006 | + | **BBa_B0030-BBa_C0078-BBa_B1006-'''BBa_R0079'''-BBa_B0030-BBa_E0040-BBa_B1006 (that we call "c") |
| - | **BBa_B0030-BBa_C0061-BBa_B0030-BBa_C0079-BBa_B1006-'''BBa_R0079'''-BBa_B0030-BBa_E0040-BBa_B1006 | + | **BBa_B0030-BBa_C0061-BBa_B0030-BBa_C0079-BBa_B1006-'''BBa_R0079'''-BBa_B0030-BBa_E0040-BBa_B1006 (that we call "d") |
**BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-'''BBa_R0040''' | **BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-'''BBa_R0040''' | ||
*Last week BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-'''BBa_R0040''' colony PCR gave a bad result. For this reason, we decided to perform colony PCR only for: | *Last week BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-'''BBa_R0040''' colony PCR gave a bad result. For this reason, we decided to perform colony PCR only for: | ||
**BBa_B0030-BBa_C0061-BBa_B1006-'''BBa_R0062'''-BBa_B0030-BBa_E0040-BBa_B1006 (7 colonies) | **BBa_B0030-BBa_C0061-BBa_B1006-'''BBa_R0062'''-BBa_B0030-BBa_E0040-BBa_B1006 (7 colonies) | ||
| - | **BBa_J23100-BBa_B0030- | + | **BBa_J23100-BBa_B0030-BBa_C0012-BBa_B1006-'''BBa_R0010''' (6 colonies) |
{| | {| | ||
| Line 73: | Line 73: | ||
*Gel result: | *Gel result: | ||
**BBa_B0030-BBa_C0061-BBa_B1006-'''BBa_R0062'''-BBa_B0030-BBa_E0040-BBa_B1006 (2nd colony) | **BBa_B0030-BBa_C0061-BBa_B1006-'''BBa_R0062'''-BBa_B0030-BBa_E0040-BBa_B1006 (2nd colony) | ||
| - | **BBa_J23100-BBa_B0030- | + | **BBa_J23100-BBa_B0030-BBa_C0012-BBa_B1006-'''BBa_R0010''' (1st colony) |
| + | |||
| + | '''08/4/08''' | ||
| + | <br> | ||
| + | *Plasmid digestion for: | ||
| + | {|cellpadding="20px" | ||
| + | |BBa_J23100-BBa_B0030-BBa_C0040-'''BBa_B1006''' (E-S) | ||
| + | |BBa_R0040 (E-X) | ||
| + | |} | ||
| + | |||
| + | *Gel run/cut/gel extraction. | ||
| + | |||
| + | *Single colonies plates for b, c, d. | ||
| + | |||
| + | * | ||
Revision as of 10:40, 22 September 2008
 Home
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|
|---|---|---|---|---|
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|  Wet Lab
|  Modeling
|  Protocols
|  Activity Notebook
|
Notebook
| Week 1 | Week 2 | Week 3 | Week 4 | Week 5 | Week 6 | Week 7 |
|---|---|---|---|---|---|---|
| Week 8 | Week 9 | Week 10 | Week 11 | Week 12 | Week 13 | Week 14 |
Week 11: 08/4/08 - 08/8/08
08/4/08
- Plasmid digestion for:
| BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006 (E-S) | BBa_R0040 (E-X) |
- Gel run/cut/gel extraction.
- Ligation: BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-BBa_R0040. We incubated ligation at 16°C overnight.
- We had 5 plates to screen with colony PCR:
- BBa_B0030-BBa_C0051-BBa_B0030-BBa_C0079-BBa_B1006-BBa_R0051-BBa_B0030-BBa_C0062-BBa_B1006-BBa_R0062-BBa_B0030-BBa_E1010-BBa_B1006 (that we call "a")
- BBa_B0030-BBa_C0061-BBa_B1006-BBa_R0062-BBa_B0030-BBa_E0040-BBa_B1006 (that we call "b")
- BBa_B0030-BBa_C0078-BBa_B1006-BBa_R0079-BBa_B0030-BBa_E0040-BBa_B1006 (that we call "c")
- BBa_B0030-BBa_C0061-BBa_B0030-BBa_C0079-BBa_B1006-BBa_R0079-BBa_B0030-BBa_E0040-BBa_B1006 (that we call "d")
- BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-BBa_R0040
- Last week BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-BBa_R0040 colony PCR gave a bad result. For this reason, we decided to perform colony PCR only for:
- BBa_B0030-BBa_C0061-BBa_B1006-BBa_R0062-BBa_B0030-BBa_E0040-BBa_B1006 (7 colonies)
- BBa_J23100-BBa_B0030-BBa_C0012-BBa_B1006-BBa_R0010 (6 colonies)
 |
- Gel result:
- BBa_B0030-BBa_C0061-BBa_B1006-BBa_R0062-BBa_B0030-BBa_E0040-BBa_B1006 (2nd colony)
- BBa_J23100-BBa_B0030-BBa_C0012-BBa_B1006-BBa_R0010 (1st colony)
08/4/08
- Plasmid digestion for:
| BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006 (E-S) | BBa_R0040 (E-X) |
- Gel run/cut/gel extraction.
- Single colonies plates for b, c, d.
