Team:Hawaii/Birds Eye View

From 2008.igem.org

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Latest revision as of 03:27, 30 October 2008

Oahu

Birds Eye View Team	Projects	Events	Resources
Sponsors	Experiments	Milestones	Protocols
	Notebook (t)	Meetings (t)

Our team aims to create the framework and tools for expanding the scope of BioBrick synthetic biology to organisms other than E. coli. Creation of a mobilizable broad-host-range plasmid enables the transfer of modularized and abstracted genetic components to act in wide range of organisms that share a similar pool of intermediate metabolites. A broad-host-range mobilizable vector would serve as a channel to "open source" the rich diversity of genetic information between organisms in a laboratory setting. We envision a wide diversity of future broad-host-range BioBrick parts, created and transported, with this or similar BioBrick vectors; each designated to be compatible with specific organism(s). These modules can also be combinatorially transformed or combined into organisms as larger devices to produce desired products. more...

Team

Margaret Ruzicka (MargaretRuzicka) Plant and Environmental Biotechnology
Grace Kwan (Gracek) Microbiology
Krystle Salazar (Ksalazar) Bioengineering

Norman Wang (Normanwang)
Adam Baker

[http://genomics.hawaii.edu/prestinglab/ Dr. Gernot Presting]
[http://www2.hawaii.edu/~scallaha/SMCsite/ Dr. Sean Callahan]
[http://www.ctahr.hawaii.edu/mbbe/faculty/gautz.html Dr. Loren Gautz]

Logistics

[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/iGEM:2008/Member_Hours Member Hours]
[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/iGEM:2008/Member_Contact_Info Member Contact Info]
Member Wiki Contributions
Member Training
Safety Compliance

Projects

Part A: Mobilizable Broad-Host-Range Plasmid Part B: Cyanobacterial protein secretion system

Experiments (t)

Notebook (t)

October
M	T	W	T	F	S	S
		[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-_1 1]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-_2 2]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-_3 3]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Notebook/2008-10-_4&preload=Template:Team:Hawaii/Notebook&action=edit 4]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Notebook/2008-10-_5&preload=Template:Team:Hawaii/Notebook&action=edit 5]
[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-_6 6]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-_7 7]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-_8 8]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-_9 9]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-10 10]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-11 11]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-12 12]
[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-13 13]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-14 14]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-15 15]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-16 16]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-17 17]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-18 18]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Notebook/2008-10-19&preload=Template:Team:Hawaii/Notebook&action=edit 19]
[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-20 20]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-21 21]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-22 22]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-23 23]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-24 24]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-25 25]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-26 26]
[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-27 27]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-28 28]	[http://2008.igem.org/Team:Hawaii/Notebook/2008-10-29 29]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Notebook/2008-10-30&preload=Template:Team:Hawaii/Notebook&action=edit 30]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Notebook/2008-10-31&preload=Template:Team:Hawaii/Notebook&action=edit 31]

Events

Milestones

Culturing Protocol Optimization: CO2 is bottle neck, need incubator retrofitted (KS)
Express GFP constructs in Synechocystis

Meetings (t)

Mon. 12-1 or Fri. Afternoon (as needed basis)

October
M	T	W	T	F	S	S
		[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_1&preload=Template:Team:Hawaii/Meeting&action=edit 1]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_2&preload=Template:Team:Hawaii/Meeting&action=edit 2]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_3&preload=Template:Team:Hawaii/Meeting&action=edit 3]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_4&preload=Template:Team:Hawaii/Meeting&action=edit 4]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_5&preload=Template:Team:Hawaii/Meeting&action=edit 5]
[http://2008.igem.org/Team:Hawaii/Meeting/2008-10-_6 6]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_7&preload=Template:Team:Hawaii/Meeting&action=edit 7]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_8&preload=Template:Team:Hawaii/Meeting&action=edit 8]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-_9&preload=Template:Team:Hawaii/Meeting&action=edit 9]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-10&preload=Template:Team:Hawaii/Meeting&action=edit 10]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-11&preload=Template:Team:Hawaii/Meeting&action=edit 11]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-12&preload=Template:Team:Hawaii/Meeting&action=edit 12]
[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-13&preload=Template:Team:Hawaii/Meeting&action=edit 13]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-14&preload=Template:Team:Hawaii/Meeting&action=edit 14]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-15&preload=Template:Team:Hawaii/Meeting&action=edit 15]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-16&preload=Template:Team:Hawaii/Meeting&action=edit 16]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-17&preload=Template:Team:Hawaii/Meeting&action=edit 17]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-18&preload=Template:Team:Hawaii/Meeting&action=edit 18]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-19&preload=Template:Team:Hawaii/Meeting&action=edit 19]
[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-20&preload=Template:Team:Hawaii/Meeting&action=edit 20]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-21&preload=Template:Team:Hawaii/Meeting&action=edit 21]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-22&preload=Template:Team:Hawaii/Meeting&action=edit 22]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-23&preload=Template:Team:Hawaii/Meeting&action=edit 23]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-24&preload=Template:Team:Hawaii/Meeting&action=edit 24]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-25&preload=Template:Team:Hawaii/Meeting&action=edit 25]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-26&preload=Template:Team:Hawaii/Meeting&action=edit 26]
[http://2008.igem.org/Team:Hawaii/Meeting/2008-10-27 27]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-28&preload=Template:Team:Hawaii/Meeting&action=edit 28]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-29&preload=Template:Team:Hawaii/Meeting&action=edit 29]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-30&preload=Template:Team:Hawaii/Meeting&action=edit 30]	[http://2008.igem.org/wiki/index.php?title=Team:Hawaii/Meeting/2008-10-31&preload=Template:Team:Hawaii/Meeting&action=edit 31]

Resources

[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/iGEM:2008/References References]
[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/Protocols Protocols]

Parts

[http://partsregistry.org/cgi/partsdb/search.cgi Parts Search]
[http://partsregistry.org/assembly/libraries.cgi?id=15 Parts Kit Content (Spring 2008)]
[http://partsregistry.org/Help:IGEM_08_DNA_distribution Parts Kit Instructions]
Parts We Submitted

Design

Help

[http://partsregistry.org/wiki/index.php/Help:Contents BioBrick Help]
Wiki Help

Links

[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/iGEM:2008 Hawaii Team Private Homepage]
iGEM 2008 Homepage
[http://partsregistry.org Parts Registry Homepage]

Other Team Pages

iGEM 2008
iGEM 2007 Winners Presentations
[http://parts2.mit.edu/wiki/index.php/Schools_Participating_in_iGEM_2006 iGEM 2006] [http://igem2006.com/results.htm Winners] [http://www.igem2006.com/presentations.htm Presentations]

Protocols (t)

[http://manoa.hawaii.edu/ ][http://manoa.hawaii.edu/ovcrge/ ][http://www.ctahr.hawaii.edu ]

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 {{:Team:Hawaii/Experiment}}
 == [[Team:Hawaii/Notebook|Notebook]] ([[Template:Team:Hawaii/Notebook|t]]) ==
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 == [[Team:Hawaii/Meeting | Meetings]] ([[Template:Team:Hawaii/Meeting|t]]) ==
-Mon. 12-1 or Thu. 9-10 (as needed basis)
+Mon. 12-1 or Fri. Afternoon (as needed basis)
-{{#calendar: title=Team:Hawaii/Meeting | year=2008 | month=08 | format=%Y-%m-%e | query=preload=Template:Team:Hawaii/Meeting}}
+{{#calendar: title=Team:Hawaii/Meeting | year=2008 | month=10 | format=%Y-%m-%e | query=preload=Template:Team:Hawaii/Meeting}}
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 <img src="http://openwetware.org/images/b/b1/Courses_violet.png" alt="Resources">
 </html>[[Team:Hawaii/Resources|Resources]] ==
 *[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/iGEM:2008/References References]
 *[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/Protocols Protocols]
-*[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/Inventory Inventory]
-*[http://packrat.stjohn.hawaii.edu/prestinglab/wiki/Shopping_List Ordering]
 === Parts ===
 *[http://partsregistry.org/cgi/partsdb/search.cgi Parts Search]
 *[http://partsregistry.org/assembly/libraries.cgi?id=15 Parts Kit Content (Spring 2008)]
 *[http://partsregistry.org/Help:IGEM_08_DNA_distribution Parts Kit Instructions]
-*[[Team:Hawaii/Parts Extracted|Parts We Extracted]]
 *[[Team:Hawaii/Parts|Parts We Submitted]]
+=== Design ===
+*[[Team:Hawaii/Primer Design for BioBricking|Primer Design for BioBricking]]
+*[[Team:Hawaii/Norman's Primer Design Notes|Norman's Primer Design Notes]]
+*[[Team:Hawaii/Adam's Primer Design Notes|Adam's Primer Design Notes]]
 === Help ===
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+Search <input type="radio" name="sitesearch" value="2008.igem.org"/>iGEM 2008<input type="radio" name="sitesearch" value="https://2007.igem.org/"/>iGEM 2007<input type="radio" name="sitesearch" value="en.wikipedia.org"/>Wikipedia
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 === Other Team Pages ===
 * [https://igem.org/Team_Wikis iGEM 2008]
-* [http://parts.mit.edu/igem07/index.php/IGEM2007_Team_List iGEM 2007] [http://parts.mit.edu/igem07/index.php/Results Winners] [http://parts.mit.edu/igem07/index.php/Presentations Presentations]
+* [https://2007.igem.org/IGEM2007_Team_List iGEM 2007] [https://2007.igem.org/Results Winners] [https://2007.igem.org/Presentations Presentations]
 * [http://parts2.mit.edu/wiki/index.php/Schools_Participating_in_iGEM_2006 iGEM 2006] [http://igem2006.com/results.htm Winners] [http://www.igem2006.com/presentations.htm Presentations]