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Team:TUDelft/Links
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| - | + | =Links= | |
| + | ===Openwetware=== | ||
| + | *[http://openwetware.org/wiki/IGEM:TUDelft/2008 our openwetware wiki] - If more info is obtained after the wiki freezing, it will be posted here. | ||
| - | == | + | ===iGEM=== |
*[http://openwetware.org/wiki/IGEM:Projects_categorized iGEM projects] - categorized list with all iGEM projects | *[http://openwetware.org/wiki/IGEM:Projects_categorized iGEM projects] - categorized list with all iGEM projects | ||
*[http://openwetware.org/wiki/IGEM:Idea_exchange Idea exchange] - some ideas posted by other teams | *[http://openwetware.org/wiki/IGEM:Idea_exchange Idea exchange] - some ideas posted by other teams | ||
| - | *[ | + | *[https://2006.igem.org/Resources Introductory resources on the iGEM competition] - you can find here several an very interesting resources on synthetic biology (lectures and introductory material in general) |
| + | *[http://partsregistry.org/wiki/index.php/Help:Contents Tutorial on Biobricks and their Assembly] - this web page seems full of useful resources both from a "theoretical" and "practical" point of view...needs a look at! | ||
| + | *[http://openwetware.org/wiki/Arking:JCAOligoTutorialHome Basic Cloning and Biobrick Assembly] - a must read document with several details on both computational and wet lab details on biobrick handling! | ||
| + | *[https://andersonlab.qb3.berkeley.edu/Tutorials/Computational_iGEM.html Yet another tutorial on iGEM] - the n<sup>th</sup> tutorial on the processes involved in iGEM participation | ||
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| + | ===Synthetic biology=== | ||
*[http://gcat.davidson.edu/GcatWiki/index.php/A_Review_of_Synthetic_Biology Review on Synthetic Biology] - this is a well structured review of synthetic biology (Davidson University) | *[http://gcat.davidson.edu/GcatWiki/index.php/A_Review_of_Synthetic_Biology Review on Synthetic Biology] - this is a well structured review of synthetic biology (Davidson University) | ||
*[http://www.bio.davidson.edu/Courses/Synthetic/synthetic_Seminar.html Reengineering life] - this is the web page of a synthetic biology seminar | *[http://www.bio.davidson.edu/Courses/Synthetic/synthetic_Seminar.html Reengineering life] - this is the web page of a synthetic biology seminar | ||
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*[http://www.sciencemag.org/cgi/content/full/319/5869/1539?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&fulltext=Shude+Yan&searchid=1&FIRSTINDEX=0&resourcetype=HWCIT Using Engineered Scaffold Interactions to Reshape MAP Kinase Pathway Signaling Dynamics.] - It is a nice description of a "toolkit of modular molecular components and circuit boards". | *[http://www.sciencemag.org/cgi/content/full/319/5869/1539?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&fulltext=Shude+Yan&searchid=1&FIRSTINDEX=0&resourcetype=HWCIT Using Engineered Scaffold Interactions to Reshape MAP Kinase Pathway Signaling Dynamics.] - It is a nice description of a "toolkit of modular molecular components and circuit boards". | ||
*[http://ocw.mit.edu/NR/rdonlyres/Physics/8-591JFall2004/158BCF49-6C44-42C7-B352-AAAE0F916807/0/l5_syllabus.pdf Genetic Switches Mini Guide] - a mini guide on genetic switches from MIT OCW | *[http://ocw.mit.edu/NR/rdonlyres/Physics/8-591JFall2004/158BCF49-6C44-42C7-B352-AAAE0F916807/0/l5_syllabus.pdf Genetic Switches Mini Guide] - a mini guide on genetic switches from MIT OCW | ||
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*[http://openwetware.org/wiki/Imperial_College/Courses/Spring2008/Synthetic_Biology Synthetic biology course-Imperial college]- This course provides a nice introduction to synthetic biology and on specific aspect of iGEM. Material available: slides of the lectures, list of key publications and web-resources. | *[http://openwetware.org/wiki/Imperial_College/Courses/Spring2008/Synthetic_Biology Synthetic biology course-Imperial college]- This course provides a nice introduction to synthetic biology and on specific aspect of iGEM. Material available: slides of the lectures, list of key publications and web-resources. | ||
*[http://openwetware.org/wiki/Intertech:iSB2008:Materials Synthetic biology course-Valencia]. Nice course organized in 3 parts: training for biologists, training for engineers and training in synthetic biology. | *[http://openwetware.org/wiki/Intertech:iSB2008:Materials Synthetic biology course-Valencia]. Nice course organized in 3 parts: training for biologists, training for engineers and training in synthetic biology. | ||
*[http://www.jbioleng.org/content/2/1/8#IDAJQH0E Engineering Bacteria to solve combinatorial problems] - a well written paper describing a smart idea | *[http://www.jbioleng.org/content/2/1/8#IDAJQH0E Engineering Bacteria to solve combinatorial problems] - a well written paper describing a smart idea | ||
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*[http://www.centreforsyntheticbiology.eu/ Workshop Synthetic Biology] - International Workshop Synthetic Biology which will be held from November 6th to 8th, 2008 in Groningen, The Netherlands. | *[http://www.centreforsyntheticbiology.eu/ Workshop Synthetic Biology] - International Workshop Synthetic Biology which will be held from November 6th to 8th, 2008 in Groningen, The Netherlands. | ||
| + | ===Color/Smell=== | ||
| + | *[http://en.wikipedia.org/wiki/Aroma_compound Aroma compound]- A good reference for different aroma molecules. | ||
| - | + | ===Temperature=== | |
| + | *[http://rna.tbi.univie.ac.at/ Vienna RNA web servers] - Vienna RNA web servers (including RNAfold and RNAeval) | ||
| + | *[http://www.sanger.ac.uk/Software/Rfam/index.shtml Rfam database] - database containing non-coding RNA families. (contains three different RNA thermometer families) | ||
{{Template:TUDelftiGEM2008_sidebar}} | {{Template:TUDelftiGEM2008_sidebar}} | ||
Latest revision as of 13:18, 19 November 2008
[http://www.tudelft.nl ]
[http://www.tudelft.nl ]
Contents |
Links
Openwetware
- [http://openwetware.org/wiki/IGEM:TUDelft/2008 our openwetware wiki] - If more info is obtained after the wiki freezing, it will be posted here.
iGEM
- [http://openwetware.org/wiki/IGEM:Projects_categorized iGEM projects] - categorized list with all iGEM projects
- [http://openwetware.org/wiki/IGEM:Idea_exchange Idea exchange] - some ideas posted by other teams
- Introductory resources on the iGEM competition - you can find here several an very interesting resources on synthetic biology (lectures and introductory material in general)
- [http://partsregistry.org/wiki/index.php/Help:Contents Tutorial on Biobricks and their Assembly] - this web page seems full of useful resources both from a "theoretical" and "practical" point of view...needs a look at!
- [http://openwetware.org/wiki/Arking:JCAOligoTutorialHome Basic Cloning and Biobrick Assembly] - a must read document with several details on both computational and wet lab details on biobrick handling!
- Yet another tutorial on iGEM - the nth tutorial on the processes involved in iGEM participation
Synthetic biology
- [http://gcat.davidson.edu/GcatWiki/index.php/A_Review_of_Synthetic_Biology Review on Synthetic Biology] - this is a well structured review of synthetic biology (Davidson University)
- [http://www.bio.davidson.edu/Courses/Synthetic/synthetic_Seminar.html Reengineering life] - this is the web page of a synthetic biology seminar
- [http://www.openwetware.org/wiki/Harvard:Synthetic_Biology_Nanocourse/2007 Nanocourse on Synthetic Biology] - this is the web page of a course at Harvard University
- [http://gardnerlab.bu.edu/publications/Gardner.TS_PhDThesis_2000.pdf Tim Gardner's PhD Thesis] - a good "how to" on genetic toggle-switch building
- [http://www.sciencemag.org/cgi/content/full/319/5869/1539?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&fulltext=Shude+Yan&searchid=1&FIRSTINDEX=0&resourcetype=HWCIT Using Engineered Scaffold Interactions to Reshape MAP Kinase Pathway Signaling Dynamics.] - It is a nice description of a "toolkit of modular molecular components and circuit boards".
- [http://ocw.mit.edu/NR/rdonlyres/Physics/8-591JFall2004/158BCF49-6C44-42C7-B352-AAAE0F916807/0/l5_syllabus.pdf Genetic Switches Mini Guide] - a mini guide on genetic switches from MIT OCW
- [http://openwetware.org/wiki/Imperial_College/Courses/Spring2008/Synthetic_Biology Synthetic biology course-Imperial college]- This course provides a nice introduction to synthetic biology and on specific aspect of iGEM. Material available: slides of the lectures, list of key publications and web-resources.
- [http://openwetware.org/wiki/Intertech:iSB2008:Materials Synthetic biology course-Valencia]. Nice course organized in 3 parts: training for biologists, training for engineers and training in synthetic biology.
- [http://www.jbioleng.org/content/2/1/8#IDAJQH0E Engineering Bacteria to solve combinatorial problems] - a well written paper describing a smart idea
- [http://www.centreforsyntheticbiology.eu/ Workshop Synthetic Biology] - International Workshop Synthetic Biology which will be held from November 6th to 8th, 2008 in Groningen, The Netherlands.
Color/Smell
- [http://en.wikipedia.org/wiki/Aroma_compound Aroma compound]- A good reference for different aroma molecules.
Temperature
- [http://rna.tbi.univie.ac.at/ Vienna RNA web servers] - Vienna RNA web servers (including RNAfold and RNAeval)
- [http://www.sanger.ac.uk/Software/Rfam/index.shtml Rfam database] - database containing non-coding RNA families. (contains three different RNA thermometer families)
