Team:TUDelft/Papers
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===Temperature=== | ===Temperature=== | ||
- | + | *Thermometer design at the nanoscale - Lee et al., February 2007 [http://www.sciencedirect.com/science?_ob=MImg&_imagekey=B82X8-4N13BB2-N-1&_cdi=33024&_user=499885&_orig=search&_coverDate=02%2F28%2F2007&_sk=999979998&view=c&wchp=dGLbVlz-zSkzS&md5=02d4712f0e1ba955f322b80941b09106&ie=/sdarticle.pdf] | |
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- | + | * RNA thermometers - Narberhaus et al., May 2005 [http://www3.interscience.wiley.com/cgi-bin/fulltext/118587582/PDFSTART] | |
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**Molecular basis for temperature sensing by an RNA thermometer - Saheli Chowdhury, Christophe Maris, Frederic Allain and Franz Narberhaus - The EMBO Journal (2006) 25, 2487–2497 | **Molecular basis for temperature sensing by an RNA thermometer - Saheli Chowdhury, Christophe Maris, Frederic Allain and Franz Narberhaus - The EMBO Journal (2006) 25, 2487–2497 | ||
- | + | *An RNA Thermosensor Controls Expression of Virulence Genes in Listeria monocytogenes - Chowdhurry et al., 2006 [http://rnaworld.bio.ku.edu/class/biol599/sp08/reprints/thermometer/Johansson(2002)Cell_110,551.pdf] | |
- | + | *FourU: a novel type of RNA thermometer in Salmonella - Waldminghaus, 2007 [http://www3.interscience.wiley.com/cgi-bin/fulltext/118542064/PDFSTART] | |
- | + | *RNA Quadruplex-Based Modulation of Gene Expression - Wieland et al., June 2007 [http://www.sciencedirect.com/science?_ob=MImg&_imagekey=B6VRP-4P8YWVM-7-8&_cdi=6240&_user=499885&_orig=search&_coverDate=07%2F30%2F2007&_sk=999859992&view=c&wchp=dGLbVzz-zSkzS&md5=97741390ae4ff0d9a8c4d5f41beb0f1d&ie=/sdarticle.pdf] | |
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- | + | *Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers - Torsten Waldminghaus · Lena C. Gaubig · Franz Narberhaus - Mol Genet Genomics (2007) 278:555–564 | |
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Revision as of 07:16, 1 August 2008
Temperature
- Thermometer design at the nanoscale - Lee et al., February 2007 [1]
- RNA thermometers - Narberhaus et al., May 2005 [2]
- Molecular basis for temperature sensing by an RNA thermometer - Saheli Chowdhury, Christophe Maris, Frederic Allain and Franz Narberhaus - The EMBO Journal (2006) 25, 2487–2497
- An RNA Thermosensor Controls Expression of Virulence Genes in Listeria monocytogenes - Chowdhurry et al., 2006 [3]
- FourU: a novel type of RNA thermometer in Salmonella - Waldminghaus, 2007 [4]
- RNA Quadruplex-Based Modulation of Gene Expression - Wieland et al., June 2007 [5]
- Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers - Torsten Waldminghaus · Lena C. Gaubig · Franz Narberhaus - Mol Genet Genomics (2007) 278:555–564
- Well more on RNA-translation regulation, so I thought let's post it.
- Engineered riboregulators enable post-transcriptional control of gene expression - G. Isaacs, D. Dqyer, C. Ding, D. Pervouchine, C. Cantor & J. Collins - Nature Biotechnology (2004) volume 7 number 22.
- A very recent review on RNA-translation regulation
- RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008
- Tuning the expression by altering the RNA sequence
- Design of 5'-untranslated region variants for tunable expression in Escherichia coli - Park et al., February 2007 [6]
- Papers about ROSE
- Some general papers
- Temperature perception in plants [12]
Color
- A general text on using micro-organisms for flavor production [13]
- The references page on the edinburgh 2007 wiki, several references on color and flavor are present [14]
- Two papers on Geosmin biosynthesis (an earthy odorant):
- Papers on plant volatile production:
- Rose Scent [19]
- Stable-light producing E. coli [20]
- Identification of genes for bacterial bioluminescence [21]
- Group in Leiden working with the Soil Bacterium Streptomyces [22]