Team:TUDelft/Papers
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*Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers - Torsten Waldminghaus · Lena C. Gaubig · Franz Narberhaus - Mol Genet Genomics (2007) 278:555–564 | *Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers - Torsten Waldminghaus · Lena C. Gaubig · Franz Narberhaus - Mol Genet Genomics (2007) 278:555–564 | ||
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** RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008 | ** RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008 | ||
** Design of 5'-untranslated region variants for tunable expression in Escherichia coli - Park et al., February 2007 [http://www.sciencedirect.com/science?_ob=MImg&_imagekey=B6WBK-4N67NVV-5-C&_cdi=6713&_user=499885&_orig=search&_coverDate=04%2F27%2F2007&_sk=996439998&view=c&wchp=dGLbVlz-zSkWA&md5=571d5d21c20c71f0567f2ae53ee0e2ea&ie=/sdarticle.pdf] | ** Design of 5'-untranslated region variants for tunable expression in Escherichia coli - Park et al., February 2007 [http://www.sciencedirect.com/science?_ob=MImg&_imagekey=B6WBK-4N67NVV-5-C&_cdi=6713&_user=499885&_orig=search&_coverDate=04%2F27%2F2007&_sk=996439998&view=c&wchp=dGLbVlz-zSkWA&md5=571d5d21c20c71f0567f2ae53ee0e2ea&ie=/sdarticle.pdf] | ||
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+ | * RNA synthetic biology - F.J. Isaacs et al., 2006 [http://knowledgecontext.org/COSMOS/RNA_synthetic_biology.pdf] | ||
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* ROSE | * ROSE |
Revision as of 07:23, 1 August 2008
Temperature
- Thermometer design at the nanoscale - Lee et al., February 2007 [1]
- RNA thermometers - Narberhaus et al., May 2005 [2]
- Molecular basis for temperature sensing by an RNA thermometer - Saheli Chowdhury, Christophe Maris, Frederic Allain and Franz Narberhaus - The EMBO Journal (2006) 25, 2487–2497
- An RNA Thermosensor Controls Expression of Virulence Genes in Listeria monocytogenes - Chowdhurry et al., 2006 [3]
- FourU: a novel type of RNA thermometer in Salmonella - Waldminghaus, 2007 [4]
- RNA Quadruplex-Based Modulation of Gene Expression - Wieland et al., June 2007 [5]
- Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers - Torsten Waldminghaus · Lena C. Gaubig · Franz Narberhaus - Mol Genet Genomics (2007) 278:555–564
- Well more on RNA-translation regulation, so I thought let's post it.
- Engineered riboregulators enable post-transcriptional control of gene expression - G. Isaacs, D. Dqyer, C. Ding, D. Pervouchine, C. Cantor & J. Collins - Nature Biotechnology (2004) volume 7 number 22.
- RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008
- Design of 5'-untranslated region variants for tunable expression in Escherichia coli - Park et al., February 2007 [6]
- RNA synthetic biology - F.J. Isaacs et al., 2006 [7]
- ROSE
- Some general papers
- Temperature perception in plants [13]
Color
- A general text on using micro-organisms for flavor production [14]
- The references page on the edinburgh 2007 wiki, several references on color and flavor are present [15]
- Two papers on Geosmin biosynthesis (an earthy odorant):
- Papers on plant volatile production:
- Rose Scent [20]
- Stable-light producing E. coli [21]
- Identification of genes for bacterial bioluminescence [22]
- Group in Leiden working with the Soil Bacterium Streptomyces [23]