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Team:TUDelft/Papers
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Some papers on RNA switches in general. | Some papers on RNA switches in general. | ||
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<li>RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008 </li> | <li>RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008 </li> | ||
<li>mRNA-mediated detection of environmental conditions - Narberhaus, August 2002 [http://www.springerlink.com/content/dv19jt8aw0vdm0ff/fulltext.pdf]</li> | <li>mRNA-mediated detection of environmental conditions - Narberhaus, August 2002 [http://www.springerlink.com/content/dv19jt8aw0vdm0ff/fulltext.pdf]</li> | ||
Revision as of 14:22, 29 October 2008
Contents |
References
Thermometer
- Thermometer design at the nanoscale - Lee et al., February 2007 [1]
Temperature
RNA switches
Some papers on RNA switches in general.
- RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008
- mRNA-mediated detection of environmental conditions - Narberhaus, August 2002 [2]
A paper on RNA switch engineering
- RNA synthetic biology - F.J. Isaacs et al., 2006 [3]
RNA thermometers
- RNA thermometers - Narberhaus et al., May 2005 [4]
- Molecular basis for temperature sensing by an RNA thermometer - Saheli Chowdhury, Christophe Maris, Frederic Allain and Franz Narberhaus - The EMBO Journal (2006) 25, 2487–2497
- An RNA Thermosensor Controls Expression of Virulence Genes in Listeria monocytogenes - Chowdhurry et al., 2006 [5]
- FourU: a novel type of RNA thermometer in Salmonella - Waldminghaus, 2007 [6]
- RNA Quadruplex-Based Modulation of Gene Expression - Wieland et al., June 2007 [7]
- Temperature-controlled Structural Alterations of an RNA Thermometer - Chowdhury et al., June 2003 [8]
- A mRNA-based thermosensor controls expression of rhizobial heat shock genes - Nocker et al., October 2001 [9]
- Molecular Processes in Biological Thermosensation - Digel et al., April 2008 [10]
Bioinformatics
- Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers - Torsten Waldminghaus · Lena C. Gaubig · Franz Narberhaus - Mol Genet Genomics (2007) 278:555–564
Color
- A general text on using micro-organisms for flavor production [11]
- The references page on the edinburgh 2007 wiki, several references on color and flavor are present [12]
Two papers on Geosmin biosynthesis (an earthy odorant):
- Biosynthesis of the earthy odorant geosmin by a bifunctional Streptomyces coelicolor enzyme, Jiang et al.[13]
- A Novel Type of Geosmin Biosynthesis in Myxobacteria, Dickschat et al. [14]
Papers on plant volatile production:
- Biosynthesis of Plant Volatiles: Nature’s Diversity and Ingenuity, Pichersky et al. [15]
- Biosynthesis of plant-derived flavor compounds, Schwab et al. [16]
- Rose Scent [17]
- Stable-light producing E. coli [18]
- Identification of genes for bacterial bioluminescence [19]
- Group in Leiden working with the Soil Bacterium Streptomyces [20]
