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Team:TUDelft/Papers
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Contents |
References
Thermometer
- J. Lee & N.A. Kotov. Thermometer design at the nanoscale. Nano Today, 2(1):48-51, 2007. doi:10.1016/S1748-0132(07)70019-1
Temperature
RNA switches
Some papers on RNA switches in general.
- RNA switches regulate initiation of translation in bacteria - Stefano Marzi, Pierre Fechter, Cle´ment Chevalier, Pascale Romby and Thomas Geissmann - Biol. Chem., Vol. 389, pp. 585–598, May 2008
- mRNA-mediated detection of environmental conditions - Narberhaus, August 2002 [1]
A paper on RNA switch engineering
- RNA synthetic biology - F.J. Isaacs et al., 2006 [2]
RNA thermometers
- F. Narberhaus, T. Waldminghaus & S. Chowdhury. RNA thermometers. FEMS Microbiol Rev, 30(1):3-16, 2006. PMID:16438677
- Saheli Chowdhury, Christophe Maris, Frédéric H-T Allain, and Franz Narberhaus. Molecular basis for temperature sensing by an RNA thermometer. The EMBO Journal, 25:2487–2497, 2006. PMID:16710302
- J . Johansson, P . Mandin, A . Renzoni, C . Chiaruttini, M . Springer, and P . Cossart. An RNA thermosensor controls expression of virulance genes in Listeria monocytogenes. Cell , 110(5):551-561, 2002. PMID:12230973
- Torsten Waldminghaus, Nadja Heidrich, Sabine Brantl, and Franz Narberhaus. FourU: a novel type of RNA thermometer in Salmonella. Molecular Microbiology, 65(2):413-424, 2007. PMID:17630972
- M. Wieland and J.S. Hartig. RNA Quadruplex-Based Modulation of Gene Expression. Chemistry & Biology, 14(7):757–763, 2007. PMID:17656312
- Temperature-controlled Structural Alterations of an RNA Thermometer - Chowdhury et al., June 2003 [3]
- A mRNA-based thermosensor controls expression of rhizobial heat shock genes - Nocker et al., October 2001 [4]
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Bioinformatics
- Genome-wide bioinformatic prediction and experimental evaluation of potential RNA thermometers - Torsten Waldminghaus · Lena C. Gaubig · Franz Narberhaus - Mol Genet Genomics (2007) 278:555–564
Color
- A general text on using micro-organisms for flavor production [5]
- The references page on the edinburgh 2007 wiki, several references on color and flavor are present [6]
Two papers on Geosmin biosynthesis (an earthy odorant):
- Biosynthesis of the earthy odorant geosmin by a bifunctional Streptomyces coelicolor enzyme, Jiang et al.[7]
- A Novel Type of Geosmin Biosynthesis in Myxobacteria, Dickschat et al. [8]
Papers on plant volatile production:
- Biosynthesis of Plant Volatiles: Nature’s Diversity and Ingenuity, Pichersky et al. [9]
- Biosynthesis of plant-derived flavor compounds, Schwab et al. [10]
- Rose Scent [11]
- Stable-light producing E. coli [12]
- Identification of genes for bacterial bioluminescence [13]
- Group in Leiden working with the Soil Bacterium Streptomyces [14]
