Team:Paris/August 1

From 2008.igem.org

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=== List of Minipreps ===
=== List of Minipreps ===
 +
{|
 +
|align="center"|L104
 +
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Icon_coding.png]]
 +
Strong rbs - lasR activator
 +
<br>D129 (BV) -  D114 (BI) 
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S124
 +
|align="center"|L105
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
 +
Strong promoter - ECFP
 +
<br>D123 (BV) - D130 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S125
 +
|align="center"|L106
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 +
Strong promoter - gfp Tripart
 +
<br>D123 (BV) - D131 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S126
 +
|align="center"|L107
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
 +
Strongest promoter - ECFP
 +
<br>D103 (BV) - D131 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S127
 +
|align="center"|L108
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 +
Strong promoter -  gfp Tripart
 +
<br>D103 (BV) - D130 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S128
 +
|align="center"|L110
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 +
Medium promoter - gfp Tripart
 +
<br>D124 (BV) - D131 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S129
 +
|align="center"|L111
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
 +
Weak promoter - ECFP
 +
<br>D104 (BV) - D130 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S130
 +
|align="center"|L112
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
 +
Weak promoter - gfp
 +
<br>D104 (BV) - D131 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S131
 +
|align="center"|L115
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
 +
pLas - ECFP
 +
<br>D105 (BV) - D130 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S132
 +
|align="center"|L116
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 +
pLas - gfp Tripart
 +
<br>D105 (BV) - D131 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S133
 +
|align="center"|L117
 +
|align="center"|[[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_reporter.png]]
 +
Double Terminator - yfp
 +
<br>D125 (FV) - D117 (FI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S134
 +
|align="center"|L118
 +
|align="center"|[[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]][[Image:Part_icon_reporter.png]]
 +
Double Terminator - rfp
 +
<br>D125 (FV) - D121 (FI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S135
 +
|align="center"|L119
 +
|align="center"|[[Image:Part_icon_terminator.png]][[Image:Part_icon_terminator.png]][[Image:Icon_coding.png]]
 +
Double Terminator - lasR activator + LVA
 +
<br>D125 (FV) - D113 (FI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S136
 +
|align="center"|L121
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 +
Strong promoter - gfp tripart
 +
<br>D106 (BV) - D130 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S137
 +
|align="center"|L124
 +
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]]
 +
Strongest RBS - rfp
 +
<br>D102 (BV) - D122 (BI)
 +
|-
 +
|- style="background: #dddddd;" 
 +
| style="background: #D4E2EF;" |S138
 +
|align="center"|L125
 +
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]]
 +
Strongest RBS - yfp
 +
<br>D102 (BV) - D118 (BI)
 +
{| border="1"  
{| border="1"  

Revision as of 18:25, 4 August 2008

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Contents

MiniPreps

Conditions

  • Use of Quiagen's protocol on all the clones cultivated on the 31th.
  • Preparation of 50µl of minipreps in water.


List of Minipreps

L104 Part icon rbs.pngIcon coding.png

Strong rbs - lasR activator
D129 (BV) - D114 (BI)

S124 L105 Part icon regulatory.pngPart icon reporter.png

Strong promoter - ECFP
D123 (BV) - D130 (BI)

S125 L106 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp Tripart
D123 (BV) - D131 (BI)

S126 L107 Part icon regulatory.pngPart icon reporter.png

Strongest promoter - ECFP
D103 (BV) - D131 (BI)

S127 L108 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp Tripart
D103 (BV) - D130 (BI)

S128 L110 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Medium promoter - gfp Tripart
D124 (BV) - D131 (BI)

S129 L111 Part icon regulatory.pngPart icon reporter.png

Weak promoter - ECFP
D104 (BV) - D130 (BI)

S130 L112 Part icon regulatory.pngPart icon reporter.png

Weak promoter - gfp
D104 (BV) - D131 (BI)

S131 L115 Part icon regulatory.pngPart icon reporter.png

pLas - ECFP
D105 (BV) - D130 (BI)

S132 L116 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

pLas - gfp Tripart
D105 (BV) - D131 (BI)

S133 L117 Part icon terminator.pngPart icon terminator.pngPart icon reporter.png

Double Terminator - yfp
D125 (FV) - D117 (FI)

S134 L118 Part icon terminator.pngPart icon terminator.pngPart icon reporter.png

Double Terminator - rfp
D125 (FV) - D121 (FI)

S135 L119 Part icon terminator.pngPart icon terminator.pngIcon coding.png

Double Terminator - lasR activator + LVA
D125 (FV) - D113 (FI)

S136 L121 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp tripart
D106 (BV) - D130 (BI)

S137 L124 Part icon rbs.pngPart icon reporter.png

Strongest RBS - rfp
D102 (BV) - D122 (BI)

S138 L125 Part icon rbs.pngPart icon reporter.png

Strongest RBS - yfp
D102 (BV) - D118 (BI)


Name Biobrick Description
MP L102
MP L103
MP L104
MP L105
MP L106
MP L107
MP L108
MP L110
MP L111
MP L112
MP L115
MP L116
MP L117
MP L118
MP L119
MP L121
MP L122
MP L124
MP L125

Transformations

Protocol

use of TOP10 Chemically competent cells

  • Defroze competent cells on ice during 5'
  • Add 5µl of DNA Ligation in 50µL of competent bacterias (or 1µL for the positive control puc19)
  • Incubate 30' on ice
  • Heat-shock the cells during 30" at 42°C without shaking
  • Put 2' on ice
  • Add 250µL of pre-warmed SOC medium (4°C)
  • Incubate 1h at 37°C under shaking (225rpm)
  • Spin at 5.000rpm during 30"
  • Remove 150µL of supernatant
  • Resuspent the pellet in the 150µL left
  • Spread on adequated plates
  • Incubate O/N at 37°C


List of transformation

Name Biobrick Description
L100 RBS-TetR-ECFP
L101 RBS-tetR-GFP tripart
L113 pBAD-ECFP
L114 pBAD-GFP
L120 tetR-ECFP
L122 RBS-lasI-ECFP
L123 RBS-lasI-GFP-ter
L126 RBS-lasR-LVA
Retrieved from "http://2008.igem.org/Team:Paris/August_1"