Team:Paris/August 1

From 2008.igem.org

(Difference between revisions)
(→Conditions)
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{| border="1"  
{| border="1"  
|align="center"|'''Name'''
|align="center"|'''Name'''
-
|align="center"|'''Biobrick'''
 
|align="center"|'''Description'''
|align="center"|'''Description'''
 +
|align="center"|'''Biobricks'''
|-
|-
|align="center"|MP L102
|align="center"|MP L102
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|-
|-
-
|align="center"|MP L104
+
|align="center"|MP L104
 +
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Icon_coding.png]]
|align="center"|
|align="center"|
Strong rbs - lasR activator
Strong rbs - lasR activator
-
<br>D129 (BV) -  D114 (BI)
+
<br>D129 (BV) -  D114 (BI)
-
|align="center"|[[Image:Part_icon_rbs.png]][[Image:Icon_coding.png]]
+
|-
|-
|align="center"|MP L105
|align="center"|MP L105
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
|align="center"|
|align="center"|
Strong promoter - ECFP
Strong promoter - ECFP
<br>D123 (BV) - D130 (BI)
<br>D123 (BV) - D130 (BI)
-
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
 
|-
|-
|align="center"|MP L106
|align="center"|MP L106
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|align="center"|
|align="center"|
Strong promoter - gfp Tripart
Strong promoter - gfp Tripart
<br>D123 (BV) - D131 (BI)
<br>D123 (BV) - D131 (BI)
-
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
 
|-
|-
|align="center"|MP L107
|align="center"|MP L107
 +
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
|align="center"|
|align="center"|
Strongest promoter - ECFP
Strongest promoter - ECFP
<br>D103 (BV) - D131 (BI)
<br>D103 (BV) - D131 (BI)
-
|align="center|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_reporter.png]]
 
|-
|-
|align="center"|MP L108
|align="center"|MP L108
-
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png[[Image:Part_icon_terminator.png]]
+
|align="center"|[[Image:Part_icon_regulatory.png]][[Image:Part_icon_rbs.png]][[Image:Part_icon_reporter.png]][[Image:Part_icon_terminator.png]]
|align="center"|
|align="center"|
Strong promoter -  gfp Tripart
Strong promoter -  gfp Tripart

Revision as of 10:55, 5 August 2008

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Contents

MiniPreps

Conditions

  • Use of Quiagen's protocol on all the clones cultivated on the 31th.
  • Preparation of 50µl of minipreps in water.


Name Description Biobricks
MP L102
MP L103
MP L104 Part icon rbs.pngIcon coding.png

Strong rbs - lasR activator
D129 (BV) - D114 (BI)

MP L105 Part icon regulatory.pngPart icon reporter.png

Strong promoter - ECFP
D123 (BV) - D130 (BI)

MP L106 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp Tripart
D123 (BV) - D131 (BI)

MP L107 Part icon regulatory.pngPart icon reporter.png

Strongest promoter - ECFP
D103 (BV) - D131 (BI)

MP L108 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp Tripart
D103 (BV) - D130 (BI)

MP L110 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Medium promoter - gfp Tripart
D124 (BV) - D131 (BI)

MP L111 Part icon regulatory.pngPart icon reporter.png

Weak promoter - ECFP
D104 (BV) - D130 (BI)

MP L112 Part icon regulatory.pngPart icon reporter.png Weak promoter - gfp


D104 (BV) - D131 (BI)

MP L115 Part icon regulatory.pngPart icon reporter.png

pLas - ECFP
D105 (BV) - D130 (BI)

MP L116 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

pLas - gfp Tripart
D105 (BV) - D131 (BI)

MP L117 Part icon terminator.pngPart icon terminator.pngPart icon reporter.png

Double Terminator - yfp
D125 (FV) - D117 (FI)

MP L118 Part icon terminator.pngPart icon terminator.pngPart icon reporter.png

Double Terminator - rfp
D125 (FV) - D121 (FI)

MP L119 Part icon terminator.pngPart icon terminator.pngIcon coding.png

Double Terminator - lasR activator + LVA
D125 (FV) - D113 (FI)

MP L121 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp tripart
D106 (BV) - D130 (BI)

MP L122
MP L124 Part icon rbs.pngPart icon reporter.png

Strongest RBS - rfp
D102 (BV) - D122 (BI)

MP L125 Part icon rbs.pngPart icon reporter.png

Strongest RBS - yfp
D102 (BV) - D118 (BI)

Stock Glycerol

Protocol

  • 1mL glycerol
  • 1mL LB
S123 L104 Part icon rbs.pngIcon coding.png

Strong rbs - lasR activator
D129 (BV) - D114 (BI)

S124 L105 Part icon regulatory.pngPart icon reporter.png

Strong promoter - ECFP
D123 (BV) - D130 (BI)

S125 L106 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp Tripart
D123 (BV) - D131 (BI)

S126 L107 Part icon regulatory.pngPart icon reporter.png

Strongest promoter - ECFP
D103 (BV) - D131 (BI)

S127 L108 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp Tripart
D103 (BV) - D130 (BI)

S128 L110 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Medium promoter - gfp Tripart
D124 (BV) - D131 (BI)

S129 L111 Part icon regulatory.pngPart icon reporter.png

Weak promoter - ECFP
D104 (BV) - D130 (BI)

S130 L112 Part icon regulatory.pngPart icon reporter.png

Weak promoter - gfp
D104 (BV) - D131 (BI)

S131 L115 Part icon regulatory.pngPart icon reporter.png

pLas - ECFP
D105 (BV) - D130 (BI)

S132 L116 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

pLas - gfp Tripart
D105 (BV) - D131 (BI)

S133 L117 Part icon terminator.pngPart icon terminator.pngPart icon reporter.png

Double Terminator - yfp
D125 (FV) - D117 (FI)

S134 L118 Part icon terminator.pngPart icon terminator.pngPart icon reporter.png

Double Terminator - rfp
D125 (FV) - D121 (FI)

S135 L119 Part icon terminator.pngPart icon terminator.pngIcon coding.png

Double Terminator - lasR activator + LVA
D125 (FV) - D113 (FI)

S136 L121 Part icon regulatory.pngPart icon rbs.pngPart icon reporter.pngPart icon terminator.png

Strong promoter - gfp tripart
D106 (BV) - D130 (BI)

S137 L124 Part icon rbs.pngPart icon reporter.png

Strongest RBS - rfp
D102 (BV) - D122 (BI)

S138 L125 Part icon rbs.pngPart icon reporter.png

Strongest RBS - yfp
D102 (BV) - D118 (BI)

Transformations

Protocol

use of TOP10 Chemically competent cells

  • Defroze competent cells on ice during 5'
  • Add 5µl of DNA Ligation in 50µL of competent bacterias (or 1µL for the positive control puc19)
  • Incubate 30' on ice
  • Heat-shock the cells during 30" at 42°C without shaking
  • Put 2' on ice
  • Add 250µL of pre-warmed SOC medium (4°C)
  • Incubate 1h at 37°C under shaking (225rpm)
  • Spin at 5.000rpm during 30"
  • Remove 150µL of supernatant
  • Resuspent the pellet in the 150µL left
  • Spread on adequated plates
  • Incubate O/N at 37°C


List of transformation

Name Biobrick Description
L100 RBS-TetR-ECFP
L101 RBS-tetR-GFP tripart
L113 pBAD-ECFP
L114 pBAD-GFP
L120 tetR-ECFP
L122 RBS-lasI-ECFP
L123 RBS-lasI-GFP-ter
L126 RBS-lasR-LVA
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